Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2875 ATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTGTTTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACGTGTAGGCGGATCTACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAATGCCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCAAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTCGGTTCAACCTGTTCGGTCTAA 336 0.4286 MKKIQQKTETNPLFVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKCPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFGSTCSV* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2875 111 PANTHER 30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC 1 105 - -
Amo19g2875 111 PANTHER RIBOSOMAL PROTEIN S7 1 105 IPR000235 GO:0006412
Amo19g2875 111 TIGRFAM rpsG_bact: ribosomal protein uS7 1 105 IPR005717 GO:0003735|GO:0006412|GO:0015935
Amo19g2875 111 Gene3D Ribosomal protein S7 domain 1 103 IPR036823 -
Amo19g2875 111 SUPERFAMILY Ribosomal protein S7 1 103 IPR036823 -
Amo19g2875 111 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 108 IPR000235 GO:0006412
Amo19g2875 111 Pfam Ribosomal protein S7p/S5e 1 103 IPR023798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2875 Amo-Chr19 132922807 132923142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2875 1 103 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 34.545 5.71e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2875 K02992 - egr:9829731 200.29