Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2858 ATGGAAGGAAAGCAGAACCTTGATGCTGCAAGAAAGTGCTTGCTAGCTAGCTTGGAAACATCAAGTGCCATTGGTTCTGCATTAGATGAATCTGAATCAAGATTGGAGCTTCTTCGCCAGCGATGTCAATCCCTGCAAACTTCATTCAGACCAATCTCCATGCAGAAATGCTCGTTCATGGACGTTGGCAATGGTATAGATAGTGTTATATGTTCTGCTGCTGCTGTCCTCAAGGTGTTTGAATTTGTGCAGCATTTGGAGAATTCTCTATTGACTGACCCTGTTTCCGATCTATGCTCTTACCTCTCAGATGCCAAGAAGCTTGAAGAAGCCTTGAAGCTTCTCACTGATAATTGCACGTTAGCAATTGGCTGGTTGCAGGGTGTTCTTGACTTCTTACAAGACAAAGTGATCACCAATGAGTTTTACCTCTTTCAGGTGAAGAAATCCTTGAGGATACTGCGAGAATTGCAAGCCGTGGAAGAGGGAGTTTGCATCAATGGAGGTTTTCTCAGTGCAGCCTTAGACAATCTAGAGACTGAGTTCCAAAGACTTCTGATGGCAAACTCAATGCCCATTCCTTTGGTTTCGTTAGGATCACACGTCGCAACACAAGCTTTGCCAGGTTCTGTTATGGGGAAGTTGCAGGCCATCATTGAGCGGTTAAATGCAAACAGCAGGCTAGCCAAGTGTAAGTCTATATATGATGAAGTTCGAGGGACGAATGCTCAAAGAACTTTGAACACTTTAGACTTGAGCTACCTTGAGATTCCAACAGCTAAATTTGAGGATGTCAGGGAAATAGCGAGTTACATAGACCAATGGGGCATTGATTTGGAGTTGGTTGTCAAGAACGTTCTTCATACTGAATTGGTCGAGAAGCATCGACCGAATGTTTTGCCAGGATCGCCATCAGATCAGGAATTCTTTCATTCATTCTATGTTTCATTCCATCGACCGGCGCAAGTGAAGCTTGAAAGGCCAGGTTCTCCTCCCCGAGATAGCGGTGTCCCTAGGCTGGTAAGCTTTGTAACTGATTACTGCAATCAGCTGCTTAATGATACATATCTACCACATTTGAAAAAGGTCCTAGAAATTCATCTTAGTTGGAGAAATGAAACATATGAAGAGGGTATTGTTTTCACACAAATATATGACACAATCAAGGAAGTTGCAGTTAATCTTGATTCTTGGTCAAAGGCCTATGAGGATATCACATTGTCCTACATTTTCATCATAAATAATCATTGCCATTTCTACAATTTGAGGGGTACCATGCTTGGGGATATGATAGGAGATACTTGGTTAGGAGCACTTGAACAATACAAGGACTATTATGCAGCACTTTATTTGAGGAATAGCTGCGGAAAGCTTCTATCAATTATTGTTCAAAAAGATTTACTTTCATCCTCATTGAGTAGCCAAGATTTGGGAAAGAGATTGCATGCTTTCAATGTAGCTTTTGATGAGAGGTACAAGATGGAATCTAGTTGGACAATTTGTGATGAGGCCTTGAGGAAAAACATATGCAAGCATTTGGTGGAATGTATTGTACCAATCTATAAGGCCTATGGTGAGGGTGCCTTGAAGTGTACACTGAGGAGTGCACAACCCAGATTGGTTCAACTGATGAACACAAAGTTCAAATCAATCTCTTCAATACAAATTCCTCCAACTAACATGTCCTCTAACTAA 1695 0.4159 MEGKQNLDAARKCLLASLETSSAIGSALDESESRLELLRQRCQSLQTSFRPISMQKCSFMDVGNGIDSVICSAAAVLKVFEFVQHLENSLLTDPVSDLCSYLSDAKKLEEALKLLTDNCTLAIGWLQGVLDFLQDKVITNEFYLFQVKKSLRILRELQAVEEGVCINGGFLSAALDNLETEFQRLLMANSMPIPLVSLGSHVATQALPGSVMGKLQAIIERLNANSRLAKCKSIYDEVRGTNAQRTLNTLDLSYLEIPTAKFEDVREIASYIDQWGIDLELVVKNVLHTELVEKHRPNVLPGSPSDQEFFHSFYVSFHRPAQVKLERPGSPPRDSGVPRLVSFVTDYCNQLLNDTYLPHLKKVLEIHLSWRNETYEEGIVFTQIYDTIKEVAVNLDSWSKAYEDITLSYIFIINNHCHFYNLRGTMLGDMIGDTWLGALEQYKDYYAALYLRNSCGKLLSIIVQKDLLSSSLSSQDLGKRLHAFNVAFDERYKMESSWTICDEALRKNICKHLVECIVPIYKAYGEGALKCTLRSAQPRLVQLMNTKFKSISSIQIPPTNMSSN* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2858 564 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 317 525 - -
Amo19g2858 564 Pfam Exo70 exocyst complex subunit 326 524 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo19g2858 564 PANTHER EXOCYST COMPLEX PROTEIN EXO70 317 525 IPR004140 GO:0000145|GO:0006887
Amo19g2858 564 Coils Coil 28 48 - -
Amo19g2858 564 SUPERFAMILY Cullin repeat-like 76 524 IPR016159 -
Amo19g2858 564 Gene3D Exocyst complex component Exo70 307 527 - -
Amo19g2858 564 Gene3D Exocyst complex component Exo70 62 292 - -
Amo19g2858 564 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 291 IPR004140 GO:0000145|GO:0006887
Amo19g2858 564 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2858 Amo-Chr19 132439661 132441454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2858 322 524 EXO70 exocyst subunit family AT4G31540 47.115 4.98e-60 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2858 K07195 - ahf:112742368 524.628