Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2857 ATGGCGGCAGCACTGCTGGGAGGAGCTGCCATTGGAGCTGCCTTCGGAGAATTGCTGAAGGCGGTTCTTGAAGTTAAGGACAAGGCCAGCAATTTCAAGAATACCTTGGCGTACCTCAGAACGATTCTGGTGAAGATAGATCCTTTGATCAAGGAAATGGAGCAACAGAACGATGAATTAGGCCGGCCGAAGGAAGAGCTGGATTCGCTGATTGAAGAGATGGAAGAGGGGACAAAGCTTGTTTACAGGTGTTCCAAGATCCACAGGTTGAATTTCCTTGCCAGGATACAGTACCAAGATGAACTTGCCAAATTGGTGGTGTCTCTAGAACGTTTCTTTAGGTTCGATGTGCCGGCTCAGACTTCAAGAGATACCAAAGAGACCTTGCTCAAAGTCACAAGGATACTTAGTGCTGTTAGGAAGCTGCCCTTAGCTAGAACTGAAAGCGCAACTGGTTCGGCTTCTGACTTGGATTCTATGCCTCTGGAATCAGATGTATGTGACACTCTACCACTGCAGCTTAATGATGAAAAGGAGAGGGAAGCTGATTCTACCGAGGAAGCCGCTGAATTAGAGCGCCTTGCTAAGCCGGTGTTGGAAGATATTGCCAGCCTTGTGCAGAAGGGTAGCCAAGCAGAGGCAGAAATACATAAAGGGCGTCAAGACTTGCAAAACAAGCATGAAGCAAGTGGGAGACTGAGACGCAGCATTGAGTTTTTTGGCAGTAGAATGGGATTTACAGTTAGTGATTCTATTTTATTCCATGAAAATAATTCGATTGCTGAAGATATCTCTAAACTAGAAGATGCGTTTAAGCAGTTATTGTCATTTTTCAGCAAGCCTGTGGAACCTAAGCACCTCTTTGATTGCCTTACAAGCTCTATGCGACCCTCGTCAGGATCTCCCGACCATGAGGGTGATCCTAGTGGAAAGAAACCTTCCTCTTCTCATCATTCTGAGTCCCACGAAAATAACAACAGTGCTGATCCTGTTTTATGTACTCTTCTCAATCTTATACCATCAAGAATTGTGTCACCTCTACATTACTTAGCTCAGCAACTGGTTGAAGCTGGTCAACAACAACAGCTACTCAGAATCTACAGAGATGCCCGTTCTAATTGGTTGGAAGAAAGCATCCAAATATTTGGGGTTGAGAAACTCAACAATGATGATGCTCAAAAGTTGCAGGTGGAGATATTAGAAGCCAAAATTGGAAGCTGGATTCATATAATGCCTATAGCCTTCAAGCTGTTTGCTGGAGAGCGGAATGTTTGTAATCTGATATTTGAAGGCTTTGATTCACTCGCTGAACAGTGTTTCTCCGAGGTGACTACAAACAATATCTCCATGCTACTTAGTATTGGTGAAGCAAATGCCAAAATCATTAAATCCCCGCAAAACTTCCATTTACTTTTAGACATGTGTGAAACAATGTTACAGCTTCATTTAGAGATTGAAACACTTTTTAGAGGCAAAGCTTGCACTGAAATAAGAGAAGCAGTATTTCGTTTTACAAAACAACTTGCACAAATGGCCAACGAGGTCTTTGAAGATCTCGAAGAAGTAGTTGAAAAGGATGCTATAGAGACCGCAGTAACAGATGGAGTGCATCCTTTAACAAGCTATATGATTAATTTTGTGAGGGTTTTATATGACTACCAGTCCACCTTGAAGCAACTGTTCCAAGAATTTGAAGGTGGAGACTATTCTTTGCAGCAGGCATCTGTAACTAAGCGAATAATGAAGGCTTTGGAATCCAAATTAGATTTGAAATCAAAGCAGTATAGAGACCCTGCATTTAAGCATATTTTTCTCATGAACAATATTTATTATATTGTTAAATTTGTTCAGAGATGGTTTAAATGCATTCTCTGCTGGTTCCATGTTATTTTTTTTCTAATCCTCTTATATTTTAGCTCTGAAGCCAAGGATATATTAGGGGATGATTGGGTACGACTACATAGTGGAATTGTGCAGCACCATGCAAATCAATACATAAGAAATGCTTGGGCAAAGACTCTGCAATGCGTATCTGATAAGGGCATATATGTTGGCATGAACAATGGTGTTAGCAGAGCAGTTCTTAAAGACAGGTTGAAGACATTCAATGATATGTTTGAGGAACTCCATCGGAAGCAATCTCAATGGAAAGTTCCTGACGCTGAATTGCAAGAGTCTCTACAGCTTGCAGTTGCTATGATCGTGTTGCCTGGCTATAGAACCTTTTTGGGACGTTTTCGGTCTTTTTTGAAGGTTAAGCACATCAAATACACACCAGAAGATCTAGAACAAATGTTGGGTGACTTTTTCGAAGGAAAATTCATGAGCCAAGCGAAACGATAA 2343 0.4149 MAAALLGGAAIGAAFGELLKAVLEVKDKASNFKNTLAYLRTILVKIDPLIKEMEQQNDELGRPKEELDSLIEEMEEGTKLVYRCSKIHRLNFLARIQYQDELAKLVVSLERFFRFDVPAQTSRDTKETLLKVTRILSAVRKLPLARTESATGSASDLDSMPLESDVCDTLPLQLNDEKEREADSTEEAAELERLAKPVLEDIASLVQKGSQAEAEIHKGRQDLQNKHEASGRLRRSIEFFGSRMGFTVSDSILFHENNSIAEDISKLEDAFKQLLSFFSKPVEPKHLFDCLTSSMRPSSGSPDHEGDPSGKKPSSSHHSESHENNNSADPVLCTLLNLIPSRIVSPLHYLAQQLVEAGQQQQLLRIYRDARSNWLEESIQIFGVEKLNNDDAQKLQVEILEAKIGSWIHIMPIAFKLFAGERNVCNLIFEGFDSLAEQCFSEVTTNNISMLLSIGEANAKIIKSPQNFHLLLDMCETMLQLHLEIETLFRGKACTEIREAVFRFTKQLAQMANEVFEDLEEVVEKDAIETAVTDGVHPLTSYMINFVRVLYDYQSTLKQLFQEFEGGDYSLQQASVTKRIMKALESKLDLKSKQYRDPAFKHIFLMNNIYYIVKFVQRWFKCILCWFHVIFFLILLYFSSEAKDILGDDWVRLHSGIVQHHANQYIRNAWAKTLQCVSDKGIYVGMNNGVSRAVLKDRLKTFNDMFEELHRKQSQWKVPDAELQESLQLAVAMIVLPGYRTFLGRFRSFLKVKHIKYTPEDLEQMLGDFFEGKFMSQAKR* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2857 780 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 133 IPR008808 -
Amo19g2857 780 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Amo19g2857 780 PANTHER EXOCYST COMPLEX PROTEIN EXO70 200 775 IPR004140 GO:0000145|GO:0006887
Amo19g2857 780 SUPERFAMILY Cullin repeat-like 206 771 IPR016159 -
Amo19g2857 780 MobiDBLite consensus disorder prediction 291 326 - -
Amo19g2857 780 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 200 775 - -
Amo19g2857 780 MobiDBLite consensus disorder prediction 305 324 - -
Amo19g2857 780 Pfam Exo70 exocyst complex subunit 406 767 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo19g2857 780 Gene3D Exocyst complex component Exo70 202 303 - -
Amo19g2857 780 Gene3D Exocyst complex component Exo70 309 780 - -
Amo19g2857 780 Coils Coil 174 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2857 Amo-Chr19 132431540 132438642 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2857 211 780 EXO70 exocyst subunit family AT5G03540 50.734 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2857 K07195 - aip:107617867 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2857 19 132431540 132438642 Amo19g2857 19 132431540 132438642 ECH
Amo19g2857 19 132431540 132438642 Amo09g2600 09 103357419 103363775 hybridization