Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2852 ATGGGAATTGCAGTGGGAGGAGCTGATTTGCTGAGTGAGAAAGCATCCATGATGAGGGAGTCTCTGCAAAAGAGCCAGACCATCACTGACAACGTTGTTACCATCCTAGGTTCCTTTGACCACCGCCTCTCCGCCCTTGAAACCGCCATGCGCCCCACTCAGATTAGGACTCATTCTATTAGGAAAGCTCATGAGAATATTGATAAGACTTTGAAGGCTGCTGAAGGGATTTTGGCTCACTTTGATCAATACCGCCAGGCAGAGGCAAAAATACTTAAGGGGCCACATGAAGATTTGGAAAACTATCTTGATGCAATTGAAAAACTGAGAAGCAACATCCATAGTGATGGTATTATCTTCCACGCCAGTAATTTGCTAGCTAAAGCCATTTCTAAGCTTGAAGATGAGTTTAAGCAGCTATTGTCATCATACAGGTTTTCGCACAACAACAATAATGCTGATGCTGTTGTATACACACCTCCTGCTCTTATACCACCAAGAATTTTGCCACTTCTACATGAATTAGCGCAGCAAATGATTGAAGCTGGACACCGGCAACAGTTGCTCAAAATATACAGAGATTCCCGTTCTAATGTGTTGGAAGAAAGCCTCCAAAAGCTTGGGGTTGAGAAACTTAACAAAGATGACGTTCAAAAGCTGCAATGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATCCATTTCATGCGTATAGCAGTCAAATTGTTGTTTGCCGGCGAGAGGAAGGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTTAGTGAACAGTGTTTTGCTGAAGTGACTACAAACAGTGTCACTATGCTACTTAGTTTTGGAGAAGCGATTGCCAAAAGCAAAAGATCCCCAGAAAAGTTATTTGTTCTTTTGGACATGTATGAAATTATGCAAGAGCTTCATTCAGAGATTGAAACACTTTTCAAAGGCAAAGCTTGCACTGAAATAAGAGAGGCTGCAATGAGTTTGACGAAACGACTTGCACAAACAGCCCAAGAGACATTTGGAGATTTTGAAGAAGCTGTTGAGAAAGATGCTACAAAGACTGCAGTGACAGATGGAACTGTTCATCCTTTGACAAGCTATGTAATCAACTACGTCAAGTTTTTATTTGACTACCGATCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGGGGAGATGACTCTTCGCAATTAGCATCTGTAACAATGCGAATAATGCAAGCTTTGCAAACTAATTTAGATGGGAAATCAAAGCAGTACAGGGATCCTGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGTAGGTCCGAAGCTAAGGATTTGCTGGGAGATGATTGGGTACAACGACATAGGAGGATTGTTCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTCCAATGCCTATCTATTCAGGGCCTTACCTCATCAGGAGGCGGAAGTGGTACTGCCGGTGGTGATGGTGCAGCCGGAAGTAGTAGTGGTGCTTCAAGGGCACTCGTTAAGGACAGGTTCAAGACGTTTAACGTTATGTTCGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACCGAGTTGCGCGAGTCTCTTAGGCTTGCAGTTGCCGAAGTCTTGTTACCCGCCTATAGATCATTTGTGAAACGATTCGGGCCTCTAGTGGAAAGTGGAAAAACTCCTCAGAAGTACATCAAATACACGGCCGAAGATCTAGACCGAATGTTGGGCGAATTTTTCGAAGGGAAGAACATGAACGAAACGAAGCGGTAA 1818 0.4274 MGIAVGGADLLSEKASMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEGILAHFDQYRQAEAKILKGPHEDLENYLDAIEKLRSNIHSDGIIFHASNLLAKAISKLEDEFKQLLSSYRFSHNNNNADAVVYTPPALIPPRILPLLHELAQQMIEAGHRQQLLKIYRDSRSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVTMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACTEIREAAMSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGDDSSQLASVTMRIMQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGAAGSSSGASRALVKDRFKTFNVMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKTPQKYIKYTAEDLDRMLGEFFEGKNMNETKR* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2852 605 Pfam Exo70 exocyst complex subunit 231 592 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo19g2852 605 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 148 601 - -
Amo19g2852 605 Gene3D Exocyst complex component Exo70 76 605 - -
Amo19g2852 605 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 145 - -
Amo19g2852 605 SUPERFAMILY Cullin repeat-like 77 596 IPR016159 -
Amo19g2852 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 145 IPR004140 GO:0000145|GO:0006887
Amo19g2852 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 148 601 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2852 Amo-Chr19 132372135 132377718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2852 9 605 EXO70 exocyst subunit family AT5G03540 73.152 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2852 K07195 - gmx:100813987 1043.88