Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2779 ATGGAGGAGGTGGCATTAAACACAAAAATGGAAAATTTGAAGTTACATGGATTTTGGTATAGTCCCTTTACGATGAGGGTGGTATGGACCCTGAAGTTGAAGGGTCTACCATATGAAAACATTGAAGAAGATCGCTACAATAAGAGTCCTCAACTTCTAGAATACAACCCTGTGCATAAGAAGACTCCAGTGCTTGTTCATGGTGGAAAACCCATTTGTGAGTCCATGATCATTGTTCAATACATTGATGAGTTATGGCCACAGAATCCATTGGTCCCTCTTGATCCCTATGAGAGAGCTCAAGCAATGTTTTGGGTTGCATATTCTGAACAAATGATTCCTGCACAGAAAGAAAAGGACGTAGAGAAGGCCTTGGAAAATTTCAAAGTCCTTGAAGATCATTGCTTAGCTGATAAGAGGAAATTCTTCGGTGGAGACAAAATTAACATTGTGGACATAGCTATTGGATCACTTTTCGCATTTTTTGTCACTATAGAAGATATTAAACAAGAGAAGGTCCTAGTAGCTGAAAGGTTCCCTCTCTTACATTTATGGTTTGATAATTTCAAGAATATTTCAATCATCAAAGAAAACTTCCCTGACAGGGAAAAAATGTCAGCTACCATAAAATCTATCATGGAGAGGAGGAGGTTGGCATCTTCCTAA 666 0.3859 MEEVALNTKMENLKLHGFWYSPFTMRVVWTLKLKGLPYENIEEDRYNKSPQLLEYNPVHKKTPVLVHGGKPICESMIIVQYIDELWPQNPLVPLDPYERAQAMFWVAYSEQMIPAQKEKDVEKALENFKVLEDHCLADKRKFFGGDKINIVDIAIGSLFAFFVTIEDIKQEKVLVAERFPLLHLWFDNFKNISIIKENFPDREKMSATIKSIMERRRLASS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2779 221 Gene3D - 92 219 - -
Amo19g2779 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 81 208 IPR010987 -
Amo19g2779 221 Gene3D Glutaredoxin 6 91 - -
Amo19g2779 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 10 214 - -
Amo19g2779 221 SFLD Glutathione Transferase (cytosolic) 9 217 IPR040079 -
Amo19g2779 221 CDD GST_N_Tau 13 86 - -
Amo19g2779 221 Pfam Glutathione S-transferase, N-terminal domain 12 84 IPR004045 -
Amo19g2779 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 11 90 IPR004045 -
Amo19g2779 221 CDD GST_C_Tau 96 210 IPR045074 GO:0004364|GO:0006749
Amo19g2779 221 SFLD Main.3: Omega- and Tau-like 9 217 IPR045073 -
Amo19g2779 221 Pfam Glutathione S-transferase, C-terminal domain 115 187 - -
Amo19g2779 221 PRINTS Omega-class glutathione S-transferase signature 11 26 IPR005442 GO:0004364|GO:0005737
Amo19g2779 221 PRINTS Omega-class glutathione S-transferase signature 86 100 IPR005442 GO:0004364|GO:0005737
Amo19g2779 221 PRINTS Omega-class glutathione S-transferase signature 142 161 IPR005442 GO:0004364|GO:0005737
Amo19g2779 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 214 IPR045073 -
Amo19g2779 221 SUPERFAMILY GST C-terminal domain-like 84 215 IPR036282 -
Amo19g2779 221 SUPERFAMILY Thioredoxin-like 12 111 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2779 Amo-Chr19 130454043 130456021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2779 11 212 Glutathione S-transferase Gene Family AT3G09270 43.256 1.79e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2779 K00799 - gmx:547584 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2779 19 130454043 130456021 Amo19g2779 19 130454043 130456021 ECH