Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2778 ATGGAAGATTTGAAGTTACATGGATTTTGGTATAGTCCCTTTACGATGAGGGTGGTATGGACCCTGAAGTTGAAGGGTCTAGCATATGAGAACATTGAAGAAGATCGCTACAATAAGAGTCCTCAACTTCTAGAATACAACCCTGTGCATAAGAAGACTCCAGTGCTTGTTCATGGTGGAAAACCCATTTGTGAGTCCATGATCATTGTTCAATACATTGATGAGTTATGGCCACAGAATCCATTGGTCCCTCATGATCCCTATGAGAGAGCTCAAGCAAGGTTTTGGGTTGCATATTCTGAACAAATGGTTCCTGCACTGCCAGCACTCATCCGAAGCACTACGCCTGAGGAGAAAGAGAAGGCTGTAGAAATGATCTGGGGAAATTTCAAAGTCCTTGAAGATCATTGCTTAGCTGATAAGAGGAAATTCTTTGGTGGGGACAAAATTAACATTGTGGACATAGCTATTGGATCACTCTTCACATTTTTTGTGACTGCAGAAGATATTAAACAAGTGAAGATCCTAGTAGCTGAAAAGTTCCCTCTCATACATTTATGGTTTGATAATTTCAAGAATGCCCCAGTCATCAAAGAAAACTTCCCTGATAGGGAGAAAATGGTGGCTACTACAAAGCCTATCATGGAGAGGATGTTGGCATCTTCCTAA 669 0.4111 MEDLKLHGFWYSPFTMRVVWTLKLKGLAYENIEEDRYNKSPQLLEYNPVHKKTPVLVHGGKPICESMIIVQYIDELWPQNPLVPHDPYERAQARFWVAYSEQMVPALPALIRSTTPEEKEKAVEMIWGNFKVLEDHCLADKRKFFGGDKINIVDIAIGSLFTFFVTAEDIKQVKILVAEKFPLIHLWFDNFKNAPVIKENFPDREKMVATTKPIMERMLASS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2778 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Amo19g2778 222 CDD GST_N_Tau 4 77 - -
Amo19g2778 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 216 - -
Amo19g2778 222 Gene3D Glutaredoxin 1 82 - -
Amo19g2778 222 SFLD Glutathione Transferase (cytosolic) 1 221 IPR040079 -
Amo19g2778 222 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Amo19g2778 222 Gene3D - 83 221 - -
Amo19g2778 222 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Amo19g2778 222 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Amo19g2778 222 PRINTS Omega-class glutathione S-transferase signature 144 163 IPR005442 GO:0004364|GO:0005737
Amo19g2778 222 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Amo19g2778 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Amo19g2778 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Amo19g2778 222 Pfam Glutathione S-transferase, C-terminal domain 107 194 IPR004046 -
Amo19g2778 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Amo19g2778 222 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Amo19g2778 222 CDD GST_C_Tau 87 209 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2778 Amo-Chr19 130171469 130173039 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2778 2 214 Glutathione S-transferase Gene Family AT3G09270 45.370 2.04e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2778 K00799 - gmx:547584 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2778 19 130171469 130173039 Amo09g2536 09 102352035 102353653 hybridization