Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2773 ATGCTGCGTCCTCCAACATATCCCTTTGAAATTCCGACCCTCATGGAACAACCCTTTCAACCATTGCCTCACAAACCAATCTCTTTCTTCCCAACAAAAACCCACTTTCAACTCCTTTTATCTCTTTTCATTTTTCTCCAATCCTCAAAAACCTTCCATTTTCCCCCATTGCACCAATCTTCCGAGCTCCAATTTCACTTTTTCGGTACATCAACGGGACTTTTGTGGTTGTATCACCTTATGAATTTGCGTATTAAGACGGCGTTGAGGGCTCAATGCACTGCTGTAACTGGTGGTTTTGTGGAGTTTATTATTAGATCTTCCACCATGAGTAATGAGGCTCATGGCAATTCAGGTGCAGGACACAAAGAAACGGTATTTGTTGGTTCAGGTGAAAGAATCCCTTCTGATATTGATGTGGATAATGTGTGTATACTAACTGGTGAAGAATTTTCTGCTGACTTCTTGCGCGATCGGGTTGGTTTTAGGAGACTTCCTATCATAACAGATGCAGACCAGCGCCTTCCGAATAGAACAGATTTCAATATCAATAATAATTATCAGATGGTTCATGAGGATCTAAATCATGGTTTTGGATTAATAAGATCAGAGTCTGATTGTAACTCAGATATGTCAGAGTATTATGTACCAAGGGGATATGTTGCTGAGGTTGACAACAGGACTTATCCGAATAATTTTAACGTGCTCCATTTTGACCCTGGCGGTAGCAGACAAGTATCAGGTCAACTTTCCAGACAAGGTTCTGGTCACTTTTCTAGGCAAGGATCTGGTCATTTTTCTCGACAAGTCTCAGGCAAATTTACAAGACAACTCTCAGGTAAAGTTTTGGAGGGAGGTTGTTGTGATCGAGTTTATGTTGTAGATTCTCCTCAGTCAAGCCATGCATATGGAACAGCATTCTCAGAAGGTTTTTTCAATAAGATAAAATTTCTCTGTAGTTTCGGGGGAAGAATTCTTCCAAGGCCAAATGATGGGAAGCTCAGATATATGGGCGGTGAGACACGGATCATATCCATCAGGAAGAACATTACTTGGGAGGAACTTATGAGCAAGACTTCTGCAATTTGCAATCAAACTCACACTATCAGGTACCAGCTTCCTGGAGAGGACCTTGATGCTCTCATTTCCGTTTGTTCTGATGAGGATCTTCATCATATGATTGAGGAGTATGAAGAGTTAGAAAGAGCTGGAGGCTCTAACCGACTACGGATCTTTCTCATACCATTAACAGAAGCTGAGACTCCAGGCTCTAATGAAGCAAGGGTCAATCAGGCAAGTGATACTGATTATCATTATGTTGTTGCTGTAAATGGTATGCACAATCCAAGTCCACGAAGGAACCCTAGCGGGCAGAATTTGGCAAGCCCATTTGGAAACAACTCTGATTACAATAGTCCAGGTTTCCATAGGGACTCACACCCAGCTGCATTTACTTTAGAGGCCAAGGATTGCAACCCAACCACCACAAATATGCCAGGCCAGTCCCCAAAGCCTTCTCAGTTTCTAACTGCAATGCAGGTAGCAAGCAAATTTAATCAAATGCCTTCTTTATCTCCCAGCTTCCTACAACCTAAAGATCCCAAAATTTCTGATGTTCAGCATTTTATGGATCATCCATGTATTGCTGTTAATGAAAGCATTCTCCCCTTTGTCATGGAAAAAGCTCCACATGACAATTCTTTGTATACCGAAAATACCAATTATGTTGATCCAATTGCATACTATAACAATCATGGTCAAGGGCCTCCGTATGTGAATTACCATCCCATTAATCAATACACAGTGGATGCTGACCAATTCAGGAAGCCTAGTGATAATTTTCATTTTCACAGACGAACTCACAGTAATGAGTTGTTATATTCTGCAATAAGTGGTCAAAATGATATGATATTCGAGAGACCTTCGGTTACCAATGAAGGTTCATATCATTTTGACAAGATTGTCTCCCATCCGCATAAGTCAAGTTTATTGCCTGTGTGTGATGATAGAGCGGGACCTCATTATAGAATGTTACATGTTAATTCTGAATCATCACTTCTGGAAAGTGAAGAGAACCTTAAAGTCCACTTGCAGTTCCCACCCAGTGTAGAGAGAGATAAATTGATATCACCAGAAACTTCAAGTCATTTGGAAGAATGTCCATCACAGCCACGAGTTGATTGGCAGGAACATGAACCTAAGTATCATAATTTACCCATTTCAGGAATGAGTCATTGTAGAAAAGGCTTGACACATATTGGTAAAGAGAACCTGCAACATGTCGGTAAAAACAATGCTCAGTTTGATGAACAGTGCATCAACTACCAACATGGATTTTGCTCATCTTCGCCCGATCTGCAAAGCAGTGAATGCAATGTATCTGTGGCACCATTTAGCTCTTTAGAATCTCCACGCAACTGGAGGGATCAACCACATGGTGCACCATTAGACAGAACTGCTTCTGAGTTTTCCATTAGGAGCCAAGATTCGTCATTGCACAACCAATATGCAACACCAGAGGCAGACAATCGACCACTTTCCCTTGTCTCTTTTGAGTTACAGCCAATTGACTCCCATGCTAGCCAAGAGTCTGTACTGCCTATCTCTTATCCGGTCATGAGTGCTTCTTCCATGAAAGAGGTTGCTATACCTCACGAGGATCCTGACTACAAAGAAGGAAGCACAGACATTAACAAAGAATCTTCCAGAAGCATCAATGATTGTAGTTCTACAGGTTTTCGGTCATGCACCCAAGTTGCTTCAAATTTAGACAAAGAGGATGAAGTTGCATCAGCATCTCCTACACAGGAAAGGGTAGATGGCCTTGTAAATACTGACAGCGAAAACATCAATAAGCCTCCTGGTGATACAACTCCTGAAACAGAAGCTGAACAGTTTGGTTTACAGATTATTGAGAATATTGATCTTGAAGAATTGCAAGAGCTAGGATCTGGAACCTTTGGAACTGTTTATCTTGGAAAGTGGAGGGGAACTGATGTTGCAATTAAGAGGATTAAAAAAAGTAGTTGTTTCTCTGGTAGATTATCCGAGCAAGAACGGATGACAAAAGATTTCTGGAGAGAGGCACAGATTCTATCTACTCTTCATCATCCAAATGTGGTAGCATTTTATGGGGTAGTTCCAAATGGCCCAGATGGAACATTGGCAACAGTAACAGAATACATGGTGCATGGATCGCTAAGAAATGTTCTTGTGAAGAAGGAGAGAGTGCTTGATCGTCGCAAAAGGATCATGATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGACTTGAAGTGTGATAATCTACTTGTTAATCTGGGGGATCCTGAGCGACCAGTATGTAAGGTTTCAGATTTTGGCCTATCAAGAATTAAACGCAACACACTTATTTCGGGTGGTGTCAGAGGAACCCTTCCTTGGATGGCACCGGAATTGCTAGATGGTAACAATCGGGTATCTGAAAAGGTTGATGTTTTCTCATTTGGCATTGCAATGTGGGAGATCTTAACTGGGGAAGAGCCATATGCTAACATGCACTGTGGTGCTATAATTGGAGGAATTGTCAATAATACGCTCAGGCCTTCTATTCCGAAACGCTGCGATTCCGAGTGGAAGAAGCTTATGGAAGAGTGCTGGAATCCTGACCCTGAAGTCAGGCCATCCTTTACAGAAATAAAAAATAGGCTTCGAAGCATGTCAGTTGCACTTCAAAATAAGCGGCATATCCGATGA 3762 0.4147 MLRPPTYPFEIPTLMEQPFQPLPHKPISFFPTKTHFQLLLSLFIFLQSSKTFHFPPLHQSSELQFHFFGTSTGLLWLYHLMNLRIKTALRAQCTAVTGGFVEFIIRSSTMSNEAHGNSGAGHKETVFVGSGERIPSDIDVDNVCILTGEEFSADFLRDRVGFRRLPIITDADQRLPNRTDFNINNNYQMVHEDLNHGFGLIRSESDCNSDMSEYYVPRGYVAEVDNRTYPNNFNVLHFDPGGSRQVSGQLSRQGSGHFSRQGSGHFSRQVSGKFTRQLSGKVLEGGCCDRVYVVDSPQSSHAYGTAFSEGFFNKIKFLCSFGGRILPRPNDGKLRYMGGETRIISIRKNITWEELMSKTSAICNQTHTIRYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSNRLRIFLIPLTEAETPGSNEARVNQASDTDYHYVVAVNGMHNPSPRRNPSGQNLASPFGNNSDYNSPGFHRDSHPAAFTLEAKDCNPTTTNMPGQSPKPSQFLTAMQVASKFNQMPSLSPSFLQPKDPKISDVQHFMDHPCIAVNESILPFVMEKAPHDNSLYTENTNYVDPIAYYNNHGQGPPYVNYHPINQYTVDADQFRKPSDNFHFHRRTHSNELLYSAISGQNDMIFERPSVTNEGSYHFDKIVSHPHKSSLLPVCDDRAGPHYRMLHVNSESSLLESEENLKVHLQFPPSVERDKLISPETSSHLEECPSQPRVDWQEHEPKYHNLPISGMSHCRKGLTHIGKENLQHVGKNNAQFDEQCINYQHGFCSSSPDLQSSECNVSVAPFSSLESPRNWRDQPHGAPLDRTASEFSIRSQDSSLHNQYATPEADNRPLSLVSFELQPIDSHASQESVLPISYPVMSASSMKEVAIPHEDPDYKEGSTDINKESSRSINDCSSTGFRSCTQVASNLDKEDEVASASPTQERVDGLVNTDSENINKPPGDTTPETEAEQFGLQIIENIDLEELQELGSGTFGTVYLGKWRGTDVAIKRIKKSSCFSGRLSEQERMTKDFWREAQILSTLHHPNVVAFYGVVPNGPDGTLATVTEYMVHGSLRNVLVKKERVLDRRKRIMIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVSDFGLSRIKRNTLISGGVRGTLPWMAPELLDGNNRVSEKVDVFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPSIPKRCDSEWKKLMEECWNPDPEVRPSFTEIKNRLRSMSVALQNKRHIR* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2773 1253 SUPERFAMILY CAD & PB1 domains 330 418 - -
Amo19g2773 1253 Pfam Protein tyrosine and serine/threonine kinase 978 1239 IPR001245 GO:0004672|GO:0006468
Amo19g2773 1253 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 854 1251 - -
Amo19g2773 1253 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 243 494 - -
Amo19g2773 1253 Pfam PB1 domain 330 413 IPR000270 GO:0005515
Amo19g2773 1253 CDD PB1_UP2 318 414 - -
Amo19g2773 1253 PRINTS Tyrosine kinase catalytic domain signature 1096 1114 IPR001245 GO:0004672|GO:0006468
Amo19g2773 1253 PRINTS Tyrosine kinase catalytic domain signature 1210 1232 IPR001245 GO:0004672|GO:0006468
Amo19g2773 1253 PRINTS Tyrosine kinase catalytic domain signature 1059 1072 IPR001245 GO:0004672|GO:0006468
Amo19g2773 1253 PRINTS Tyrosine kinase catalytic domain signature 1166 1188 IPR001245 GO:0004672|GO:0006468
Amo19g2773 1253 ProSiteProfiles Protein kinase domain profile. 976 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2773 1253 ProSitePatterns Protein kinases ATP-binding region signature. 982 1007 IPR017441 GO:0005524
Amo19g2773 1253 MobiDBLite consensus disorder prediction 448 478 - -
Amo19g2773 1253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1102 1114 IPR008271 GO:0004672|GO:0006468
Amo19g2773 1253 Gene3D Phosphorylase Kinase; domain 1 970 1064 - -
Amo19g2773 1253 SUPERFAMILY Protein kinase-like (PK-like) 975 1239 IPR011009 -
Amo19g2773 1253 Gene3D Transferase(Phosphotransferase) domain 1 1065 1252 - -
Amo19g2773 1253 MobiDBLite consensus disorder prediction 449 474 - -
Amo19g2773 1253 SMART serkin_6 976 1245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2773 1253 SMART PB1_new 329 416 IPR000270 GO:0005515
Amo19g2773 1253 CDD STKc_MAP3K-like 982 1239 - -
Amo19g2773 1253 Gene3D - 333 415 - -
Amo19g2773 1253 PANTHER SERINE-THREONINE PROTEIN KINASE 854 1251 - -
Amo19g2773 1253 PANTHER SERINE-THREONINE PROTEIN KINASE 243 494 - -
Amo19g2773 1253 MobiDBLite consensus disorder prediction 886 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2773 Amo-Chr19 130126698 130132698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2773 314 467 MAP Kinase Kinase Kinase AT1G16270 53.846 1.33e-40 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo19g2773 PK_Tyr_Ser-Thr 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2773 - - aip:107619554 2354.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2773 19 130126698 130132698 Amo19g2773 19 130126698 130132698 ECH