Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2738 ATGGACGTGCAGTACCCGCCAGTTGTGGCACCACCTCATAAGAGCAGCCTACAGAAGTTCAAGGTCAAATTGAAGGAAACTTTGTTCCCTGATGATCCAATGAGACAATTCAAGGGTCAACCATTTGGTACAAAAATAGTCCTTGCTGCTCAGTATGTGTTCCCTATTCTTCAATGGCTCCCTCAATATAGCCTCAAACTCTTTAAATCTGACATTATTTCTGGTATCACCATTGCTAGCCTTTCAATCCCTCAGGGGATTAGTTATGCTAAGCTTGCAGGTTTACCTCCAAGTTTTGGACTTTATTCTAGTTTTGTTCCCCCACTTGTGTATGCTGTTCTTGGAAGCTCAAAGGACCTTGCAATTGGTCCAGCAGCTATTACTTCTCTTGTGTTAAGATCCATGCTTACGCAAGGAGTGTCTGCCACATCACAACCTCAACTCTTTCTTCAGCTTGCTTTTACTTCCACTCTTTTTGCTGGTGTCTTTCAGGCAGCTCTTGGTATTCTAAGGCTTGGATTTATCATTGACTTTCTATCAAAGGCCATACTTGTCGGATTCATGGCTGGAGTTGCTGTAATTGTATCTCTGCAGCAGCTTAAAAGTCTTCTTGGAATCACACATTTCACCAAAAAGATGACCATCGTTGATGTATTGAGTTCTGTTTTTAGCAATATTCACGAGAGCTTAAAGAAGCCAAAATATTTCTGGGTCTCAGCTGGAGCTCCTCTTCTGTCAGTAATAACGTCAACTGCCATACTTTTTGCAATTAGGGGTAAACATCCTGCCATTCTTGTTATTGGAAAGCTTCCAGAAGGAGTAAATCCTCCTTCAGTAAAGATGTTGTATTTCGAAGCAACTCATTTAGGACTGGCCATTAAAACTGGGATCATTGTTGGTATTTTATCCCTCACTGAATCTATTGCAGTTGGAAGGACATTTGCAGCTATAAGAAAATACAAAGTGGATGGTAATAAGGAAATGATAGCTATTGGGTTGATGAATGTAATAGGATCCACCACATCATGTTTTGCTTCAACAGGATCATTCTCTAGGACGGCTGTGAACCACAACGCAGGGGCAAAAACAGCGATGTCGAACATAGTTATGTCGGTGGCAGTGTTGGTGACACTCTTGTTTCTGATGCCATTATTGCACTACACACCGCATGTGGTGTTGGGTGCAATCATAGTAACAGCAGTCATTGGCTTTGTTGATATACCTGCTGCTTACCGTATTTGGAAGATTGACAAATTCGATTTCGTTGTCATGTTGACTGCATTCTTCGGTGTCATTTTTATCTCAGTTGAGTATGGCCTAGCTCTTGCTGTTGGTTTATCAATCTTAAGGATCCTATTGCAAATTACAAGACCAAAAACAGTAATGTTGGGGAACATACCAGGGACAAGATTGTATCGAGATCTTCACCATTATAATCAAGCTACAAGAATTCCTGGTTTTCTCATTTTAAGCATAGAAGCTCCCATCAATTTTGCCAACATCACCTATCTCCAACAAAGGACTTTGCGATGGATTGAAGAAGAAGAAGAAAGCATGAAGGATAACTCAGTTTTTCGGTTTGTGATATTGGAGATGTCAGCATTGGTGAATCCTCTTGCTGAAGTGATAGAAAAGCTGACAAAGGCAGATGAATCTGACAGCTTCATTAGAGAAGACTACCTCTTCTTGTCTGTTGGAGAGGCTGTTGGAAAACTTTCATCAATAATGGAGAACTCCCCTTCAGTCACCATGCAACAAGAGCAGCCACCTTACATGTCCCCTCCAACAGAACTCCCAGTAGAGTCGCCTGAATACTCTAACAACGTTTAA 1830 0.4131 MDVQYPPVVAPPHKSSLQKFKVKLKETLFPDDPMRQFKGQPFGTKIVLAAQYVFPILQWLPQYSLKLFKSDIISGITIASLSIPQGISYAKLAGLPPSFGLYSSFVPPLVYAVLGSSKDLAIGPAAITSLVLRSMLTQGVSATSQPQLFLQLAFTSTLFAGVFQAALGILRLGFIIDFLSKAILVGFMAGVAVIVSLQQLKSLLGITHFTKKMTIVDVLSSVFSNIHESLKKPKYFWVSAGAPLLSVITSTAILFAIRGKHPAILVIGKLPEGVNPPSVKMLYFEATHLGLAIKTGIIVGILSLTESIAVGRTFAAIRKYKVDGNKEMIAIGLMNVIGSTTSCFASTGSFSRTAVNHNAGAKTAMSNIVMSVAVLVTLLFLMPLLHYTPHVVLGAIIVTAVIGFVDIPAAYRIWKIDKFDFVVMLTAFFGVIFISVEYGLALAVGLSILRILLQITRPKTVMLGNIPGTRLYRDLHHYNQATRIPGFLILSIEAPINFANITYLQQRTLRWIEEEEESMKDNSVFRFVILEMSALVNPLAEVIEKLTKADESDSFIREDYLFLSVGEAVGKLSSIMENSPSVTMQQEQPPYMSPPTELPVESPEYSNNV* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2738 609 PANTHER BNAA09G30120D PROTEIN 8 227 IPR030313 -
Amo19g2738 609 Pfam Sulfate permease family 68 426 IPR011547 GO:0016021
Amo19g2738 609 ProSitePatterns SLC26A transporters signature. 97 118 IPR018045 GO:0008271|GO:0008272
Amo19g2738 609 ProSiteProfiles STAS domain profile. 477 535 IPR002645 -
Amo19g2738 609 Gene3D STAS domain 457 573 IPR036513 -
Amo19g2738 609 PANTHER BNAA09G30120D PROTEIN 535 574 IPR030313 -
Amo19g2738 609 PANTHER BNAA09G30120D PROTEIN 227 535 IPR030313 -
Amo19g2738 609 MobiDBLite consensus disorder prediction 579 609 - -
Amo19g2738 609 Pfam STAS domain 478 535 IPR002645 -
Amo19g2738 609 PANTHER SULFATE TRANSPORTER 8 227 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo19g2738 609 PANTHER SULFATE TRANSPORTER 535 574 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo19g2738 609 PANTHER SULFATE TRANSPORTER 227 535 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2738 Amo-Chr19 129572279 129583112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2738 3 574 Inorganic Solute Cotransporters AT3G15990 57.143 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2738 K17471 - gmx:100779433 836.254