Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2673 ATGATGGACCAAATCTATGGTGTTCTCAAACTTAGGATTCAGAGAGGCATTAATCTCGCAATTCGCGATTTGCGTTCTAGTGATCCTTATGTTGTTGTCAGCATGGGTACTCAGAAACTGAAAACTAAGATCATGCATAAAGATCTCAATCCTGAGTGGAATGAAGAATTGACCCTTATGGTTGACGATATTAAAACTCCAATACATCTGAAAGTTTTCGACAAAGATTTGTTCTCAGCAGATGATGAAATGGGTGAAGCAGTTATAGATATAAAGCCATATGTTAAGTGCTGGAACAAAGGATTGGAAAAACTCCCAAATGGTTGTGTAGTGAAAAGAATTCAGCCAAATGAAAATAACTATCTTGCAGAAGAGAGTCCCTGTATTTGGCACAATGGGACTATAATCCAACGTATGCTCTTAAAATTGAGAAATGTTGAGTGTGGTGAATTACTCTGTGAACTTGAATGGCTTAGTGTACTAGGTTCTATGGGCTTATTAGAGCTACAACACTTACATGCTTAA 525 0.3733 MMDQIYGVLKLRIQRGINLAIRDLRSSDPYVVVSMGTQKLKTKIMHKDLNPEWNEELTLMVDDIKTPIHLKVFDKDLFSADDEMGEAVIDIKPYVKCWNKGLEKLPNGCVVKRIQPNENNYLAEESPCIWHNGTIIQRMLLKLRNVECGELLCELEWLSVLGSMGLLELQHLHA* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2673 174 Pfam C2 domain 8 93 IPR000008 -
Amo19g2673 174 SMART C2_3c 8 103 IPR000008 -
Amo19g2673 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 162 IPR044562 -
Amo19g2673 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 92 IPR035892 -
Amo19g2673 174 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Amo19g2673 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 2 162 - -
Amo19g2673 174 Gene3D C2 domain 2 163 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2673 Amo-Chr19 127341805 127342823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2673 39 166 C2H2 Transcription Factor Family AT1G70790 52.308 6.21e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2673 - - ahf:112769638 336.265