Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2664 ATGGAGACAGTGACACCTTTTGCATCTAGAAAAGAAATGAAGACTGTCACTATTAAGGCAACATATAGAGAAGATATCATAAGGTTTAGGGTTTCTTTGAATTGTGGAATTGTGGAACTGAAAGAACAAGTTGCCAAAAGGTTGAAACTAGAAATAGGTACTTTTGATATCAAGTACCTTGATGATGATCATGAATGGGTTTTGATTGCATGTGATGCAGATCTACAAGAGTGCATAGATGTTTCAAGATCATCAGCAAGTAACATAATAAGAGTTTTGGTGCATGAAATAACTTCCAATCTTGGAAGCTCACGAGAGAGCTCAGGGGAGTGA 333 0.3694 METVTPFASRKEMKTVTIKATYREDIIRFRVSLNCGIVELKEQVAKRLKLEIGTFDIKYLDDDHEWVLIACDADLQECIDVSRSSASNIIRVLVHEITSNLGSSRESSGE* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2664 110 CDD PB1_NLP 16 96 IPR034891 -
Amo19g2664 110 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 2 109 - -
Amo19g2664 110 Gene3D - 11 96 - -
Amo19g2664 110 ProSiteProfiles PB1 domain profile. 15 97 IPR000270 GO:0005515
Amo19g2664 110 Pfam PB1 domain 15 96 IPR000270 GO:0005515
Amo19g2664 110 PANTHER PROTEIN NLP8 2 109 IPR045012 GO:0003700
Amo19g2664 110 SUPERFAMILY CAD & PB1 domains 12 100 - -
Amo19g2664 110 SMART PB1_new 15 97 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2664 Amo-Chr19 127114618 127115019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2664 9 110 NLP Transcription Factor Family AT4G24020 69.608 1.41e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2664 - - aip:107618129 208.764