Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2619 ATGGAATCAGTGTCAGAAGAACAGAATATTGCAGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCGATTTTATCAAAATTATGCCAAGCGCGTTGGTTTTGTTACTAAGATAAGGTTTATCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAGGGGAAACACAAGTCTATAGTTTCACCAATAGAAAAGACCAACCCTAGAACCAACTACAATTGCCCCGCAAGGATTTCTATTAGGTTGAATAAGGAGGGTCTTTGGATTATATCGAAGGTATGTTTGGATCATTCACATCCTCGTGATCCAGAGATGGCAAAACTGTTGACACGTAATAGAGAGATGAGTATGTGTGTCGAGTCATTGAGAGGAATGATGAAGTAG 408 0.3897 MESVSEEQNIAVGMCFGTIEDANRFYQNYAKRVGFVTKIRFIRRVGKDKVPKNQMITCNREGKHKSIVSPIEKTNPRTNYNCPARISIRLNKEGLWIISKVCLDHSHPRDPEMAKLLTRNREMSMCVESLRGMMK* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2619 135 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 109 - -
Amo19g2619 135 Pfam FAR1 DNA-binding domain 24 108 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2619 Amo-Chr19 124547088 124548767 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g2619 FAR1 1.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2619 - - adu:107485253 235.728