Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2604 ATGGGTAACAAGGGTCTTGGTGGTGTTACCATTAAGAAGACGAATCAGGCGTTGATCGTCGGAATCTACGATGAGCTTATGACTCCAGGGCAGTGCAACATAATTGTTGAAAGGCTGGGTGATTATCTCATTGATACGGGTCATGGATCTGCGTCTAGGGAAGAAGTTATGGTGCTTGAGAAGTGA 186 0.457 MGNKGLGGVTIKKTNQALIVGIYDELMTPGQCNIIVERLGDYLIDTGHGSASREEVMVLEK* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2604 61 SUPERFAMILY Profilin (actin-binding protein) 2 47 IPR036140 -
Amo19g2604 61 Gene3D Dynein light chain 2a, cytoplasmic 1 53 - -
Amo19g2604 61 PANTHER PROFILIN 2 47 - -
Amo19g2604 61 Pfam Profilin 2 47 IPR005455 GO:0003779
Amo19g2604 61 PRINTS Plant profilin signature 21 34 IPR005455 GO:0003779
Amo19g2604 61 PRINTS Plant profilin signature 34 47 IPR005455 GO:0003779
Amo19g2604 61 PRINTS Plant profilin signature 1 16 IPR005455 GO:0003779
Amo19g2604 61 PANTHER PROFILIN 2 47 IPR005455 GO:0003779
Amo19g2604 61 PRINTS Profilin signature 17 30 IPR005455 GO:0003779
Amo19g2604 61 PRINTS Profilin signature 30 47 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2604 Amo-Chr19 124033090 124033722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2604 2 47 Cytoskeleton Gene Families AT4G29350 76.087 1.69e-20 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2604 K05759 - csin:114285323 85.1149