Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2601 ATGGAGGTATGGAATACAGTAATGGTTGGGATGGTGGCAGATGACGAGGCCGTGGTAATGATCGCACAAAGCGAGATGTTTCACTTTTATTGGATCAAGGATTCAAGACACAGATGCACTGCTTCTTTCACCCATTGTCAAATGACATGTCCATATAACTTGTTATGTTGGTTGTGCAATTGGGAATGTGATAAGGATACTGTTAGAGAGGGCGAACATGTTTTTGGTGTTGCTCACATTTTTGCATCATTCAATGACACCTTTATTACTGCATCTCAAGTTCATGGGGGACAGTTGGCAGCTGGTTTTGTAGATGGTTCTGTTAGACTTTATGACATCAGGACACCTAAAATAGTAGAAAAGGTGGTGGGGATTGGCTTTCAACCTGGACTAGACCCAAGAAAGTTTGGGTGTTTGAGCTGTGTTTGTAACATCCCAAAATTGGGGGAAGAAGTACAAGCTGAGAAAAGAGCCAAGGAAGGAGGATCTAAGGTTCTCGGCCAAGTTCTGCTGCAAACTAGCCACATTCTCCCTTAA 537 0.4302 MEVWNTVMVGMVADDEAVVMIAQSEMFHFYWIKDSRHRCTASFTHCQMTCPYNLLCWLCNWECDKDTVREGEHVFGVAHIFASFNDTFITASQVHGGQLAAGFVDGSVRLYDIRTPKIVEKVVGIGFQPGLDPRKFGCLSCVCNIPKLGEEVQAEKRAKEGGSKVLGQVLLQTSHILP* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2601 178 Gene3D Ribosomal protein S11 60 110 IPR036967 GO:0003735|GO:0005840|GO:0006412
Amo19g2601 178 SUPERFAMILY WD40 repeat-like 84 124 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2601 Amo-Chr19 123739429 123742846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2601 67 96 Cytoplasmic Ribosomal Protein Gene Family AT2G36160 70.000 3.07e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2601 K07204 - adu:107474466 142.51