Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2570 ATGGCAGAATCGCAAGAAAAACGTGTTTCAAGTGAGGATCCTCCTTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTCGATATAGTGGAACCTCTAGAGTGTGTAGCCTCTGACGATTCAGAAAATTTATCATACGAACAAGAAAACTTAGCCGGCGATGTCGCAGGCCATGCTCACGAGCCGAGCAAGGCCGCACAGTTGTCGGATGTTACAGATGTTGGAAGTGATGAGATGGAGCTTGGTGATGAGTTACCAGATCATGGTTGCTTACAAGAAGATGAGATACCAAGAGTTGGAATGCGGTTTGCTCAGTTAAAGATGGCTCATGACTTTTATGTGACATATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGATAAGATCACAAAGGCTCCCATTAACCAAGCTATACACTGTAATCGTGATGGGATCCGCGAGTCTCGTGTTAAAGCACCAACACGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGATGTGCAAGACTGGGTTTTGCTCAAGGTTGACTTGATGCACTCTCACCCCTGTTCACCGAAAAAGGCAGTGTACTACCATGAGTATAGGCAGTTGACCATGCATGCGAAATCTGTATGA 660 0.4409 MAESQEKRVSSEDPPLCTSPSRNSLMEVDIVEPLECVASDDSENLSYEQENLAGDVAGHAHEPSKAAQLSDVTDVGSDEMELGDELPDHGCLQEDEIPRVGMRFAQLKMAHDFYVTYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKDVQDWVLLKVDLMHSHPCSPKKAVYYHEYRQLTMHAKSV* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2570 219 MobiDBLite consensus disorder prediction 1 24 - -
Amo19g2570 219 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
Amo19g2570 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2570 Amo-Chr19 122702479 122705408 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g2570 FAR1 3.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2570 - - ahf:112778726 445.662