Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2561 ATGTTTCTGTCGAATTTGCACAAGTGTTTTACGTTCCTGTCTGATATCGATATGCATGCTGCAGAGATTGGGAAGATTTTCCAGTCTCATTCCTTGCTGATGGGTTCATTCACTATTAAGAAAAGTAGTAGTTTGCTCAGTAGCTTGAATGTTGGCAAGAAAAGGCTCTGTAAGTTAGTGCAGGATAATCCAGAAGGGATGCAGAATTGGGCTGTGGGGAAGAAAATTCAGCCTTATCCTGAGGATAAGGAAACAAGGGCTCTGAAAACAGAGTTCTTGAAAACAAAGTTCTTGTTGAGCCTTGGATACGAAGAGAACTCGGGGGGAATAAAACAGGCTTTTAAGCTGTTCAGAGGTAAGGGAGATGAGCTTCAGGAGAGATTTGATTTTATTGTTAATGCTGGCTTGGATGTTAAGGATGTTCGCGAAATGATTAAGGCTTCACCTCAGATTCTTAATCAGACCACAGATATGATCAACACGAAAATTGAGTATCTTGTGAATGAAGGATATCCTATATCAAGTTTAGTCAATTTCCCATCTTTTCTCTCCTATACACTTTGTAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTTAGAGACCATAGAGTTGTTCACCCCAGGCTTGCTTTGAGCACTATAGTTGCATGCTCAGAGGAATTATTCTTACGGTTGTATGTAAATCAGCATCCATCTGGCTTTCAAGTTTGGCAAGATTTGAAGTCTGAAATTTATTCTGAGAGATAA 750 0.392 MFLSNLHKCFTFLSDIDMHAAEIGKIFQSHSLLMGSFTIKKSSSLLSSLNVGKKRLCKLVQDNPEGMQNWAVGKKIQPYPEDKETRALKTEFLKTKFLLSLGYEENSGGIKQAFKLFRGKGDELQERFDFIVNAGLDVKDVREMIKASPQILNQTTDMINTKIEYLVNEGYPISSLVNFPSFLSYTLCRVKLRLSMYNWLRDHRVVHPRLALSTIVACSEELFLRLYVNQHPSGFQVWQDLKSEIYSER* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2561 249 PANTHER CGI-12 PROTEIN-RELATED 5 242 IPR003690 GO:0003690|GO:0006355
Amo19g2561 249 Gene3D Transcription termination factor 3, mitochondrial 1 241 IPR038538 -
Amo19g2561 249 Pfam mTERF 89 224 IPR003690 GO:0003690|GO:0006355
Amo19g2561 249 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 5 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2561 Amo-Chr19 122520533 122521282 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo19g2561 mTERF 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2561 - - zju:107432340 291.967