Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2557 ATGTGTCCCAAGAAGGAAAACCCTAACGCGCGTTGCCACCATTGTCAAACCCGAAAACAACGATTTGTGCTCTGCTCCGGCGATGATCTGCACCAGCGACTGCTCCGACGACGATCTGCTCCAGCGACGATTTTCTTGGCATTCTCCTCCGACGAGATTGTGTGCTGGGAACTGAAAGGATCTCTCCTGCGACCTCCAGCGACGATCTCCTCTGGAAATGTTCTCCTCTGGCGGCGCGTTCTCCTCCTTCAGCGAGCTTCTATGATTTGGCTTCGATATGAAGATTTGTCGCCACTCATCTCATCGCCATCATTCATCTCTGCGCCATCCAACACCGCTGTTGCTACCTTCAGCAAGCTTCCACAATTTGGTTTTGCCATCTCTATCACTTCTAATAGGAGAACACTAAAACAAAGCATCCTTAATTGCTTTATGAGGCCAAGCTTTACAACATTCTCCAAGGAGGAAGTATATGGGGAGGATAATGTTCTTGTGATGGATTTGCTGGGGCCTAGTCTTGAGGATCCCTTTGTGTATTGTGGAAGGAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATATGTGCATTTCAAAGGTTTTCTACATAGAGATATAAAGCCTGACAACTTCCTCATGGGACTTGGTCGGAAAGCAAACCAGCTCATCTCAGCTCCTGGAATCTCTTCCACTTCCAAATGTAAGAATATTTATTCCTTCACTCCATTTGAGACTTTCTTAGTTGCTTCACTCCATTTTGTTGGACTAAGTGGCTGGCTTCCAGGCTCAAGGAGCTTAAGGAACAAAATAGAAGTTTCACATGAATCAAGAAGGCGAGCTGCTTCATTACCCATGTTGCTGTGTCATGGAATATGTGATGATGTAGTTCCATACAAATACGGAGAGAAATCAGCCCAATGCTTATGTTCATCAGGATTTCGATATGTTGCATTCAAAAGCTATGATGGATAA 993 0.4461 MCPKKENPNARCHHCQTRKQRFVLCSGDDLHQRLLRRRSAPATIFLAFSSDEIVCWELKGSLLRPPATISSGNVLLWRRVLLLQRASMIWLRYEDLSPLISSPSFISAPSNTAVATFSKLPQFGFAISITSNRRTLKQSILNCFMRPSFTTFSKEEVYGEDNVLVMDLLGPSLEDPFVYCGRKFSLKTVLMLADQMMTRIEYVHFKGFLHRDIKPDNFLMGLGRKANQLISAPGISSTSKCKNIYSFTPFETFLVASLHFVGLSGWLPGSRSLRNKIEVSHESRRRAASLPMLLCHGICDDVVPYKYGEKSAQCLCSSGFRYVAFKSYDG* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2557 330 SUPERFAMILY Protein kinase-like (PK-like) 158 223 IPR011009 -
Amo19g2557 330 Gene3D alpha/beta hydrolase 229 330 IPR029058 -
Amo19g2557 330 Pfam Phospholipase/Carboxylesterase 261 328 IPR003140 GO:0016787
Amo19g2557 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Amo19g2557 330 SUPERFAMILY alpha/beta-Hydrolases 260 329 IPR029058 -
Amo19g2557 330 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 157 228 - -
Amo19g2557 330 Gene3D Transferase(Phosphotransferase) domain 1 115 228 - -
Amo19g2557 330 PANTHER CASEIN KINASE-RELATED 157 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2557 Amo-Chr19 122299954 122303451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2557 214 330 Acyl Lipid Metabolism Gene Families AT3G15650 46.154 2.52e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Amo19g2557 Abhydrolase_2 5.8e-05 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2557 K08960 - aip:107618904 243.432