Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2550 ATGGAACAAAAGAAATCTTCTATTGTTCTTGTGTTCAGAGAATTCAAGCCACACTTTCTGATGGTGTTAGCCCAAGTTGGCTATGCATTCTTGTATTTCATCACTGAAGCTTCCTTCAATCATGGGATGAGTCCTTTCTTGTATGTAACTTACCGCCATATTGTCGCGGCGGTTGTCATGTTCCCATTTGCATTCTTTCTAGAGAGAAATGAGAGACCAAAGCTCACATTTGCTCTGTTCATGGAAATTTTTGTGCTTTCCTTGGTTGGGATTTGTGTACCAATCAATATGTACTTTGCAAGCCTGCGGTACACTTCTCCAACCTTTGTTGCTTCCATTGTCAACGTCATAGCTTCCCTTACCTTCATCATTGCCGTAGTACTAAGGTATGAGGCTCTTGATGTTCGAGATCCCCGGGGAATAGCGAAAGTTATAGGGACAATGTTGTCCTTAAGCGGGGTAATGACAATGACACTATACAAAGGACCGACCATGAGAAATTTGTGGCGTCCCGTAATTCATATTCCAGGAAAGAGTTCTGCTGCAGCACATGAGAACTGGCTCAAGGGTTCTCTTCTTGCAGTTATAAGCTGTGTTTCATGGTCTGTCTGGTATATCATGCAGGCAGCCACTTTGAAAAGATATCCAGCACAGTTGTCCCTTACTACATGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTCACAGTCTTAATTATAGGGCATAAACCTTCAGCTTGGACTATAGGGTTCAACATTGACCTGTGGTCCACATTATATGGTGGAATTGTGATAGCTGGTTTGATAATATACATTCAGCTGTGGTGCACTGAGAAAAAGGGGCCAGTCTTCGTTACAATGACTACCCCCCTTTGTACCATTCTTGCTGCAATTTTAGCATACTTTGTCTTTGGTGAGAAACTTTACCTCGGCAGCATCATAGGCGCAACTTTTGTCATCATTGGTCTATACTTGCTATTGTGGGGCAAAGAAGGTGACCAAGAGATTCATATCAACACCAAACCGTGCAGTGGTGAAGATCCAGAATGCAGACTACAATCAGTACCTTAG 1074 0.4283 MEQKKSSIVLVFREFKPHFLMVLAQVGYAFLYFITEASFNHGMSPFLYVTYRHIVAAVVMFPFAFFLERNERPKLTFALFMEIFVLSLVGICVPINMYFASLRYTSPTFVASIVNVIASLTFIIAVVLRYEALDVRDPRGIAKVIGTMLSLSGVMTMTLYKGPTMRNLWRPVIHIPGKSSAAAHENWLKGSLLAVISCVSWSVWYIMQAATLKRYPAQLSLTTWMCFVGAAQSAVFTVLIIGHKPSAWTIGFNIDLWSTLYGGIVIAGLIIYIQLWCTEKKGPVFVTMTTPLCTILAAILAYFVFGEKLYLGSIIGATFVIIGLYLLLWGKEGDQEIHINTKPCSGEDPECRLQSVP* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2550 357 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0016021|GO:0022857
Amo19g2550 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 331 - -
Amo19g2550 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Amo19g2550 357 PANTHER WAT1-RELATED PROTEIN 15 345 - -
Amo19g2550 357 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Amo19g2550 357 Pfam EamA-like transporter family 17 156 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2550 Amo-Chr19 122056035 122061670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2550 16 352 Nodulin-like Gene Family AT5G07050 40.057 5.47e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2550 - - gmx:100527877 563.918