Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2487 ATGAAATTCGACCCGATCCCAATCGGTTCCTGCTCCAAAGAGAACCAGAGCATCTACCAGCAGTTGTTTAAATTATGCCGATTCAGGTATGCATTATTGCATTATCATGTTACTGGGCCACATCCACACGGACAAGGAGTTCCATCTTCACCTTCTACTGGGACACCTCTAAGTATGGAAACGCCACCAAAATCTGCAAATTCTGATCAGGGTTTGATGAAGAAACTGAAAGGGTTTGGGGGGCTTGCAATGTCAATTGGGAATGGCCATACTGATAGTACAAAGCTTAGAACTGAAAACAAGCTGTCACAGAGTTTGATAATAGGATAA 330 0.4303 MKFDPIPIGSCSKENQSIYQQLFKLCRFRYALLHYHVTGPHPHGQGVPSSPSTGTPLSMETPPKSANSDQGLMKKLKGFGGLAMSIGNGHTDSTKLRTENKLSQSLIIG* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2487 109 MobiDBLite consensus disorder prediction 45 68 - -
Amo19g2487 109 PANTHER G-BOX-BINDING FACTOR 3 35 105 - -
Amo19g2487 109 PANTHER G-BOX-BINDING FACTOR 3-RELATED 35 105 IPR044827 GO:0003700|GO:0006355|GO:0043565
Amo19g2487 109 MobiDBLite consensus disorder prediction 39 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2487 Amo-Chr19 117608428 117611817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2487 42 93 bZIP Transcription Factor Family AT2G46270 56.604 4.13e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2487 K09060 - aip:107616567 130.954