Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2460 ATGGCAGTATCGCGGCGGTTATGGGAACTGCAATCCCAGGCAGCGAACAAGATCTGCGTCGACTGCTCTCAGAAGAACCCACAGTGGGCCTCCGTCTCTGACGGCGTATTCATGTGCCTCGAGTGCTCCGGCAAGCACTGCGGCCTCTGTGTCCACATCTCCTTCGTCAGATCCGTCACCATGGACTCCTGGTCCAAAATCCAGATCAAGAAGATGGAGGCTGGCGGCAACGACGCCCTTAACGCCTTCCTCTCTCAGTATGGTATTCCAAAGGAAACTGATATTGTCACAAAGTACAACACCAGCGCCGCCAAAATCTACCGCGACCGCATCCAGGCCCTCGCCAAAGGCCGTCCCTAG 360 0.5639 MAVSRRLWELQSQAANKICVDCSQKNPQWASVSDGVFMCLECSGKHCGLCVHISFVRSVTMDSWSKIQIKKMEAGGNDALNAFLSQYGIPKETDIVTKYNTSAAKIYRDRIQALAKGRP* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2460 119 SUPERFAMILY ArfGap/RecO-like zinc finger 4 108 IPR037278 -
Amo19g2460 119 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Amo19g2460 119 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Amo19g2460 119 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Amo19g2460 119 Gene3D Arf GTPase activating protein 2 118 IPR038508 -
Amo19g2460 119 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 119 IPR001164 GO:0005096
Amo19g2460 119 SMART arf_gap_3 4 118 IPR001164 GO:0005096
Amo19g2460 119 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 119 IPR044519 GO:0005096|GO:0016192
Amo19g2460 119 CDD ArfGap_ArfGap1 5 117 - -
Amo19g2460 119 Pfam Putative GTPase activating protein for Arf 6 100 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2460 Amo-Chr19 115929572 115929931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2460 5 91 C2H2 Transcription Factor Family AT4G21160 44.318 5.08e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2460 K12492 - mnt:21404179 211.46