Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2416 ATGGAACCGCCATTGCAGTCGCAACAGCAACTATCACCGCCGCAAACTTCGCCGCGCTCAACCACTATCCTCGGCAAGTACCAGCTCACGCGCCTCCTCGGCCGCGGAAGCTTCGCCAAGGTCTACCAGGCGCTCACGCTTTCCGATGGCTCCACCGTAGCAGTCAAAATCATTGATAAATCCAAGACGGTGGACGCCGCCATGGAGCCACGCATCGTTCGCGAGATCGCCGCCATGCGCCGCCTCCACGACCACCCTAACATCCTCAAGATCCACGAGGTCATGGCTACCAGGACCAAGATCCACCTCGTCGTCGAGTTCGCCGCTGGCGGGGAGCTATTCGCCAAGATCCTCCGCCGCGGACCGCTTCCGGAGCAAGCGGCGAGGCGGTACTTCCAGCAGCTGGTCTCTGCGCTCCGGTTCTGCCACCGTAACGGCGTTGCACACCGAGACCTTAAGCCGCAGAATCTCCTCCTCGACGCCGCCGGAAACCTGAAGGTCTCCGATTTCGGCCTCTCCGCACTTCCGGAACAGCTCAACAACGGCCTCCTACAAACCGCATGCGGAACTCCGGCTTACACCGCGCCGGAGATACTCCGCCGCCGTGGAAACTCCGCCGGATACGACGGCTCAAAGGCAGACGCCTGGTCTTGCGGCCTTGTCCTTTACAATCTCCTCGCTGGAAGCCTCCCGTTCAACGACTCAAACATTCCGGAGATGTGCCGGAAGATTTCCCGGCGAGATTACCGGTTCCCAGAGTGGATATCGAAACCTGCGCGTTTCGTTATCTACCGGTTACTCGACCCGAACCCGGAAACTCGCATGAGTGTAGAAGCTCTCTACCAGAATTCATGGTTCAAGAAATATTTAAAACCCGAACCCGAGGAGAGTGTATTCGGCTCGGATCCTTATTATGAGAGTTCTTGCAAAGGGATTAACAATAAAGGAATGAATGCGTTTGATATCATTTCTCTGTCTTCGGGTTTGGACTTGAGGGGGTTGTTTGAAACAACGTCCTTTGGGAATAGGAGGGAGAAGAGGTTTACTTCAGATGCTAAGGCAGAGGTGGTAGAGGCGAAGGTGAAGGAAATTGGCGGGGTTTTAGGGTTTAGGGTTGAGGTCGGAAAGAACGGAGCGATTGGGTTGAGGAAAGGGAAGGTGGTGTTGGTGGTCGAGGTTCTTGAGATTGTAGAGGGTGAGTTGTTGATGGTGGATGTGAGGGTGGTTGAAGGTGGTTTCGAGTTTGAGGAGCTTCATTGGAGGGACTTGAAAGATGGGTTGCAAGATGTTGTGCTTTCTTGGCATAATGAATCGCCACTGCTATCACAGTCACCATAG 1338 0.5501 MEPPLQSQQQLSPPQTSPRSTTILGKYQLTRLLGRGSFAKVYQALTLSDGSTVAVKIIDKSKTVDAAMEPRIVREIAAMRRLHDHPNILKIHEVMATRTKIHLVVEFAAGGELFAKILRRGPLPEQAARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDAAGNLKVSDFGLSALPEQLNNGLLQTACGTPAYTAPEILRRRGNSAGYDGSKADAWSCGLVLYNLLAGSLPFNDSNIPEMCRKISRRDYRFPEWISKPARFVIYRLLDPNPETRMSVEALYQNSWFKKYLKPEPEESVFGSDPYYESSCKGINNKGMNAFDIISLSSGLDLRGLFETTSFGNRREKRFTSDAKAEVVEAKVKEIGGVLGFRVEVGKNGAIGLRKGKVVLVVEVLEIVEGELLMVDVRVVEGGFEFEELHWRDLKDGLQDVVLSWHNESPLLSQSP* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2416 445 SMART serkin_6 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2416 445 CDD CIPK_C 318 428 - -
Amo19g2416 445 SUPERFAMILY Protein kinase-like (PK-like) 23 296 IPR011009 -
Amo19g2416 445 Pfam NAF domain 317 373 IPR004041 GO:0007165
Amo19g2416 445 MobiDBLite consensus disorder prediction 1 20 - -
Amo19g2416 445 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 18 437 - -
Amo19g2416 445 PANTHER SERINE/THREONINE KINASE 18 437 - -
Amo19g2416 445 Gene3D Kinase associated domain 1, KA1 318 432 - -
Amo19g2416 445 ProSiteProfiles Protein kinase domain profile. 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2416 445 Gene3D Transferase(Phosphotransferase) domain 1 18 317 - -
Amo19g2416 445 Pfam Protein kinase domain 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2416 445 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Amo19g2416 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Amo19g2416 445 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2416 Amo-Chr19 112201844 112204424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2416 12 436 CBL-interacting serine-threonine protein kinases AT4G14580 60.739 2.63e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo19g2416 Pkinase 1.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2416 K12761 - gmx:100784173 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2416 19 112201844 112204424 Amo19g2416 19 112201844 112204424 ECH