Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2412 ATGAAGAATCTTATAGGGATTGATTCAAGAGTGGAACAAGTGATTTGTCAAATAGGCCTTGGATTGAATGATGTTCGCTATATAGGCATATGGGGAATGGGCGGCATAGGTAAGACAACTATTGCTAGAGCTGTCTTTGAAACTATTCGAAGTAGATTTGAAGTTGCTTGCTTTCTTGCTGACGTAAGGGAGCGATGTGAGAAAAAAGATATTCCTGACATACAAAAACAACTTCTTCATCAAATGGGTATTAGTTCAACTGCTCTTTATAGCGAGTATGATGGGAGAGCAATACTTCAAAACTCGTTACGTCTCAAAAAAGTTCTTCTTGTTCTTGATGATGTAAATCATGAAAAGCAATTAGAGAATTTAGCTGGAGAGCAAGATTGGTTTGGTTCTGGCAGCAGAATAATAATTACAACCAGAGACCAACATTTGCTACAGGAACAAGGGGTGCATGAAACTTATGAGGTTGAAGGGTTAGTGGAAATTGAAGCCTTTAATCTCTTTTGTTCAAAAGCTTTTAAACTGCCAGAACCTACAGAAGGGTTTTTGGATTTGACCAAAGAAGTAGTCAATTATAGTGGCGGTCTTCCATTGGCACTTAAAGTGTTGGGGTCCTATCTTTATTGCAGATCCATTGAAGTTTGGCATAGTGCTATTGGAAAAATAAAGAATTCTTCCCATTCCGATATTATTGATGTATTGAAAATAAGCTATGATGGTTTAGATTCCATGGAAAAGAACATTTTTCTAGATATTTCATGTTTCTTCAAAGGAAGATCAAGAGATTATGCAACAAAGATATTAAAATTATGTGGTCATCATGCGTAA 834 0.3621 MKNLIGIDSRVEQVICQIGLGLNDVRYIGIWGMGGIGKTTIARAVFETIRSRFEVACFLADVRERCEKKDIPDIQKQLLHQMGISSTALYSEYDGRAILQNSLRLKKVLLVLDDVNHEKQLENLAGEQDWFGSGSRIIITTRDQHLLQEQGVHETYEVEGLVEIEAFNLFCSKAFKLPEPTEGFLDLTKEVVNYSGGLPLALKVLGSYLYCRSIEVWHSAIGKIKNSSHSDIIDVLKISYDGLDSMEKNIFLDISCFFKGRSRDYATKILKLCGHHA* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2412 277 Gene3D - 2 154 IPR027417 -
Amo19g2412 277 Gene3D - 160 250 IPR042197 -
Amo19g2412 277 Pfam NB-ARC domain 24 240 IPR002182 GO:0043531
Amo19g2412 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 254 IPR027417 -
Amo19g2412 277 PRINTS Disease resistance protein signature 102 116 - -
Amo19g2412 277 PRINTS Disease resistance protein signature 195 209 - -
Amo19g2412 277 PRINTS Disease resistance protein signature 27 42 - -
Amo19g2412 277 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 277 - -
Amo19g2412 277 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 277 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2412 Amo-Chr19 111899552 111900385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2412 5 274 WRKY Transcription Factor Family AT5G45050 37.091 1.32e-46 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2412 - - adu:107485873 540.036