Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2410 ATGGAAAGACCTTTGATAACAATAGATGAGAATAATATGTTTGCCATCCATAATTTGCTTCAAGACATCAACAACCTGGGGCTACAGATTGTGGCAGTGTTCTATCATGTCAAGCCTTGCAACGTCAGGCATCAAATTGGAGCCTTTGAAGATGCTTTCAAGAAACATGAACTCAGATTTGGACAAGAAAGTGACAGGGTTAGAAGATGGAGAAATGCCTTAACACAAGTTGTCAMTTATTCTAATTGGGACTCTGAACGATTCGAGCCATACTCGTGGAAAGCATTACTCAACTTATACATGAAAAGATTGATTATGAAATTACCATCTTCAATGGAGAATCTCGTAGGGATTGATTTAAGGTTGGAAGAAGTTGTTAGACACATTGGTCTTGGGGAGAATGATGTTCGTTTCATTGGCATATGTGGAATGGGTGGCATAGGTAAGACAACTATTTCTAGAAGAGTCTATGAAAGCATTCGAAGTGAATTTAAAGCTAGTTGCTTTCTTGTCGAT 516 0.3818 MERPLITIDENNMFAIHNLLQDINNLGLQIVAVFYHVKPCNVRHQIGAFEDAFKKHELRFGQESDRVRRWRNALTQVVXYSNWDSERFEPYSWKALLNLYMKRLIMKLPSSMENLVGIDLRLEEVVRHIGLGENDVRFIGICGMGGIGKTTISRRVYESIRSEFKASCFLVD 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2410 172 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 83 IPR035897 -
Amo19g2410 172 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 29 170 - -
Amo19g2410 172 Pfam TIR domain 25 86 IPR000157 GO:0007165
Amo19g2410 172 Gene3D - 11 103 IPR035897 -
Amo19g2410 172 Gene3D - 104 172 IPR027417 -
Amo19g2410 172 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 170 IPR044974 GO:0006952
Amo19g2410 172 Pfam NB-ARC domain 132 164 IPR002182 GO:0043531
Amo19g2410 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 170 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2410 Amo-Chr19 111887349 111888829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2410 116 172 WRKY Transcription Factor Family AT5G45050 42.105 4.88e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2410 - - ahf:112797503 259.61