Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2399 ATGATGGTCAAATTTGAGAGGAATAAACATAAATTAAAGGAAGATTGGGACAGAAAAATTTTTAACCATAAAAAGCAAAACAGTGATTGTCACCAGATGTTGATCAGCAACATGTCACAAGATTGGAAGGCACATTTGGGGAAAAATAATGAGCCTGGTAAAACAAGGACTTCTGCTAATGGAATTCATTCAAATAGAATTCTTGGCAGAGGTGCATCCGGAACAGCTTACCATGACTTTATTGAGGACATTCAAGTGGCTGTCAAGATGCTTTCCCTATCTTCAGTGCATGGATATCAACAATTTGTTGCAGAGGTTAAGCTTCTAATAAGAGTATATCATCGAAATCTGACTTCTATTATTGGCTATTGCAATGAAGAAACTAATATAGGACTCATCTATGAATATATGGCAAATGGAAACTTAGGTGAACATCTTTCAGGCTTTGATCCTGCATCCACCAACTTCCCTCCAAACAACAACATCCTACCACCACAGACCTCTATTGAAGTTGTTAACCAGAGAGATACAGATCTTTTCTTCATGTGGCAAAGGTACAAGATTTTGGAACATGAAGCAGAAGAAAAGGCACAAGCCCTGAAGAAGATTAGAGAGACGGTGAATCACAAAAATCATATAGATGGTAGTGTAAAATTGATTGGTACTTCATTATTTGGTGTTCCTAAAGTTAAGCAATAA 699 0.3677 MMVKFERNKHKLKEDWDRKIFNHKKQNSDCHQMLISNMSQDWKAHLGKNNEPGKTRTSANGIHSNRILGRGASGTAYHDFIEDIQVAVKMLSLSSVHGYQQFVAEVKLLIRVYHRNLTSIIGYCNEETNIGLIYEYMANGNLGEHLSGFDPASTNFPPNNNILPPQTSIEVVNQRDTDLFFMWQRYKILEHEAEEKAQALKKIRETVNHKNHIDGSVKLIGTSLFGVPKVKQ* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2399 232 ProSiteProfiles Protein kinase domain profile. 62 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2399 232 Coils Coil 186 206 - -
Amo19g2399 232 Gene3D - 174 232 IPR046427 -
Amo19g2399 232 PANTHER OS07G0107800 PROTEIN-RELATED 65 148 - -
Amo19g2399 232 SUPERFAMILY Protein kinase-like (PK-like) 56 150 IPR011009 -
Amo19g2399 232 Gene3D Transferase(Phosphotransferase) domain 1 27 159 - -
Amo19g2399 232 Pfam Protein tyrosine and serine/threonine kinase 63 148 IPR001245 GO:0004672|GO:0006468
Amo19g2399 232 PANTHER PUTATIVE-RELATED 65 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2399 Amo-Chr19 111249432 111252705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2399 66 148 Receptor kinase-like Gene Family AT1G51880 61.446 1.09e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g2399 PK_Tyr_Ser-Thr 3.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2399 - - aip:107619033 476.863