Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2365 ATGAGCTTTTCATCACTGCTACTACCACTTTTCTTCACTCTCATGATTCTTTTCCTCTTGAACCCAACAATGGTATATGGGAATAATGATGAGGAAGAAGAAGAGCTACTAGCACTGATGGACATGAAGGATAGTATGGATCCATATGGTCACTACCTAACCTCATGGACCATCAATGGCAACCCATGTGATGGTGCTTCCTTTGAAGGTGTGGCCTGCAATGAAAAGGGTCAAGTTGCAAATATTTCTTTGCAGGGAAAAGGTCTCTCAGGGAAGCTTTCACCAGCCATTGGTGGGCTCAAGCATTTGACAGGACTCTACTTGCATTATAACTCTTTGTATGGTGAGATACCAAGGGAAATTGCAAACTTGACTCAGCTTAGTGATTTGTACCTGAATGTGAATCATCTTTCTGGGAAAATCCCAACGGAGATTGCCAACATGAACAACTTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCATACCTACCCAGCTTGGTTCTTTGAAGAAGCTGAGTGTTGTTGCGCTTCAGTCAAACCAGTTGACTGGCGCTATCCCTGCTAGTTTAGGTGACTTGCCTATACTGATGAGGCTTGATTTGAGTTCTAACAAACTCTTCGGTTCCATTCCCACTAGCCTTGCTGATCCTCCTTCACTCAAAGTTCTTGATCTTCACAACAATACTCTTTCTGGGAATGTGCCTCCTGCTCTGAAGAGACTTGATCATGGATTTCTCTATGAGGACAATCCGGGGCTATGTGGACTTGACTTTCCATCCCTTAAGGCTTGCGGTTCTTTAAATCGCAGGCCTGAACCTTATGGAGCAGCAACAAGAGATATCCCAGAAACTGCAAATGTGAAGTTACCTTGCAATGGAAGCCAGTGCCTAAACTCTCCAAAATCAAAACAAGTACCATCCATTGCCATTGGCATAGTCGTCATTGTGATTGCAGTGTCAGCAATTGGTCTCTTTGCCTTCACATTATTTCGCAGGCGAAAACAGAAGCTAGGAAACTCTTTTCATGTCTCTGATGGCCGGCCAAGTATCGACGAATCCAGGAGTATATACAGGAAAAGTGGATCTCCTTTGGCGAGCCTCGAGTACTCTACTGGATGGGACCCTTTAGCTGATTGTAGGAGCTTCAATGGTGTGGAAAATGAAGACGACATGTTCCAGAGTTTCAGGTTCAACTTGGAAGAAATCGAGTCTGCGACTCAGTATTTCTCAGAGATGAATCTGTTGGGAAAGAGTAGCTTCAGTGCAACATATAAAGGAGTTCTAAGAGATGGTTCAGTTGTTGCTGTGAAGAGTATCAGCAAAACTAGCTGCAAGTCAGATGAAGGTGAATTCTTGAAGGGATTGAGCATTTTGACATCTCTGAGGAATGATAATTTGGTGAAGCTGAGAGGGTTTTGTTGTTCAAGTGGAAGAGGTGAATGCTTCTTGGTTTATGACTTTGTTTCCAACGGAAATCTTTCACGGTTTCTTGATGTGAAGGAAGGAGATGGAGAAGTTCTTGAATGGTCAACCAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTGTAGCATATTTACATGCACACAAGGTAAAGAAACCGGTTCTTGTTCACCAAAACATCTCGGCCGAGAAAGTGCTCGTCGATCACAGGTATAACCCAATGCTGGCAGATTCCGGCCTTCACAAGCTTCTTACCAATGACATTGTCTTCTCTGAACTCAAGGCCAGTGCAGCAAAGGGTTACCTTGCTCCTGAGTATGCCACCACCGGCCGGTTCACCCAGACCAGTGATGTTTATGCTTTCGGGGTGCTCCTATTGCAGATCCTCTCCGGGAAGCAGCAGATCAGTAACTCAATCAGGCTCGCCGCGGAAGCATCAAGATTCCAAGAATTCATTGATCCAAATCTCCATGGGAGATTCTTTGAATACGAAGCCACTAAACTGGCAAAAATCGCTTTGCTTTGCTGCAATGAGTCTCCCTTTGAGAGGCCATCTATGGAAGCCATTGTTCAAGAACTGGGAAATTGTAGTAGCTGTATCTGA 2055 0.4423 MSFSSLLLPLFFTLMILFLLNPTMVYGNNDEEEEELLALMDMKDSMDPYGHYLTSWTINGNPCDGASFEGVACNEKGQVANISLQGKGLSGKLSPAIGGLKHLTGLYLHYNSLYGEIPREIANLTQLSDLYLNVNHLSGKIPTEIANMNNLQVLQLCYNQLTGSIPTQLGSLKKLSVVALQSNQLTGAIPASLGDLPILMRLDLSSNKLFGSIPTSLADPPSLKVLDLHNNTLSGNVPPALKRLDHGFLYEDNPGLCGLDFPSLKACGSLNRRPEPYGAATRDIPETANVKLPCNGSQCLNSPKSKQVPSIAIGIVVIVIAVSAIGLFAFTLFRRRKQKLGNSFHVSDGRPSIDESRSIYRKSGSPLASLEYSTGWDPLADCRSFNGVENEDDMFQSFRFNLEEIESATQYFSEMNLLGKSSFSATYKGVLRDGSVVAVKSISKTSCKSDEGEFLKGLSILTSLRNDNLVKLRGFCCSSGRGECFLVYDFVSNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGVAYLHAHKVKKPVLVHQNISAEKVLVDHRYNPMLADSGLHKLLTNDIVFSELKASAAKGYLAPEYATTGRFTQTSDVYAFGVLLLQILSGKQQISNSIRLAAEASRFQEFIDPNLHGRFFEYEATKLAKIALLCCNESPFERPSMEAIVQELGNCSSCI* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2365 684 Gene3D Ribonuclease Inhibitor 148 267 IPR032675 -
Amo19g2365 684 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 682 - -
Amo19g2365 684 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Amo19g2365 684 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Amo19g2365 684 Gene3D Ribonuclease Inhibitor 35 147 IPR032675 -
Amo19g2365 684 CDD STKc_IRAK 418 677 - -
Amo19g2365 684 Gene3D Phosphorylase Kinase; domain 1 383 490 - -
Amo19g2365 684 SUPERFAMILY L domain-like 35 244 - -
Amo19g2365 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 682 - -
Amo19g2365 684 ProSiteProfiles Protein kinase domain profile. 412 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2365 684 Gene3D Transferase(Phosphotransferase) domain 1 491 683 - -
Amo19g2365 684 SUPERFAMILY Protein kinase-like (PK-like) 396 677 IPR011009 -
Amo19g2365 684 Pfam Protein tyrosine and serine/threonine kinase 416 677 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2365 Amo-Chr19 108351277 108354439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2365 7 525 Miscellaneous Gene Families AT4G22730 53.889 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Amo19g2365 PK_Tyr_Ser-Thr 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2365 - - gmx:100775422 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2365 19 108351277 108354439 Amo09g1953 09 82139520 82142361 hybridization
Amo05g3170 05 93171927 93175881 Amo19g2365 19 108351277 108354439 PCT
Amo19g2365 19 108351277 108354439 Amo05g3170 05 93171927 93175881 PCT