Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2356 ATGAATGTCACTGACTTCATTCCATATAGTCTTGTGCATTATGTGTTCAATCCTGCACTGGTTGGAGGAAATTTGGCAGATACTATAACATTTGAAAATTTTGTTACACTTGAACATTCTCATTACATTTATAATAGAATCAATTTTGGGATGGATCTTAGTCAAAATCACAAGGGCTCCCAAAAACCTAGAAGGTTTGATAATTGGTGTCTATTCAGCAGGCATAAAAACTTAGGAAACTTGCCTATAATCATTATCCCAGCTATATGCAAAGATAAAGGTAGCCCTTTTAGAGATCCTGATGTCTGCTACAAATATGGGATGACATATTCTTCACTATCTATATGCAAAGATAAAGATAGCTCTTATTTTGGATCATTGGCTACTCGTGTTATCAAACATTACAAGTTGAACCAAAGGATGCCACTTATATATGTGAAGCTATACACATACCAGATCTTTAGGGCATTGTCTTATATTCATCGTTGTATTGGAGTTTGCCATCGTGATATCAAGCCTCAAAATCTATATGCCTTTTATATATGTGAATATGATTTACAGTTAGGTACTCTGACTAGTGATATTGCTAATATGAATGATATTTTGCTTGCCAAGCCTGCTGGCTTAAAGAATAAAACTTTGATTTTTATGGATCAGATATGGTTGGAGAAGAGATATGTTGGGTCTCGCCACACTTTGGAATGGTTAAATACTGCAGGCAGAAATGTTAAGACAGGTGGACATGGGCTGCTACAATCTTGCAAAGCTCAAATATTGTTTGAGAATATGAGGTCAGTGGTCCTTTTTGATATGCTAGTGAAGCAATGA 828 0.3551 MNVTDFIPYSLVHYVFNPALVGGNLADTITFENFVTLEHSHYIYNRINFGMDLSQNHKGSQKPRRFDNWCLFSRHKNLGNLPIIIIPAICKDKGSPFRDPDVCYKYGMTYSSLSICKDKDSSYFGSLATRVIKHYKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLYAFYICEYDLQLGTLTSDIANMNDILLAKPAGLKNKTLIFMDQIWLEKRYVGSRHTLEWLNTAGRNVKTGGHGLLQSCKAQILFENMRSVVLFDMLVKQ* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2356 275 Gene3D Transferase(Phosphotransferase) domain 1 122 195 - -
Amo19g2356 275 ProSiteProfiles Protein kinase domain profile. 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2356 275 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 10 116 - -
Amo19g2356 275 PANTHER - 10 116 IPR045033 GO:0080162
Amo19g2356 275 SUPERFAMILY Protein kinase-like (PK-like) 125 177 IPR011009 -
Amo19g2356 275 Pfam Protein kinase domain 135 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2356 Amo-Chr19 107752204 107755056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2356 220 246 Organic Solute Cotransporters AT5G45380 85.185 8.88e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Amo19g2356 Pkinase 6.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2356 K00924 - aip:107646954 246.514