Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2351 ATGCATTCTCTCTCCATTGAAGATGTGACTTCCTCCGCTGTCGCCGCCGCCGCCGCCGCCGCCGCTCGGTCGCACGAGCTCCTTCCACCGCCGCTCTCAATGCGGTTGCTCTTTTCGTCGTCACACGAGCTCTCTCGGCCGTGCTCTTGTCTTACGAGCTCCCTCCGCCGCCGCTCTCGCGCTGCTTCTTCTCTCCTCGCTGGAGGTTTGTCATCGTCTCTTCTGGTCGCTGTTAGTTCAGCTGCTATAGATTTTGGAGACTTCTTTAAAGGTCCATTGCCAGGAAAGTTTCTCAAGCTTTTAGGGTTTCTTGCCTTGTCACGTCTTGGTGTATATCCGAAGTTGCAAGATCTTCAGAAAAGAGAAGGCGAGGCTGGAAGAAAGAAAGTTCTTCAATACACTCGATATGCGTCAGTTGGATTTGCAATTGTACAGGCAATTGGCCAAGTCCTCTTTTTACGTCCTTATGTGAATGACTTTACTGAAGCAGACATGCAGAAATTGAGTCATGCGTTAAAAGTAATTTCAAAGAATCAAAGAACATGGTTCACAGCAGCGCTTCTACAATTAAGTGCCGAAGAATATCCACCTGCTGATGCAACTGATGACAAGTTGTATTTGAAAGGTGCTACCAATAGAGATGGTGATTTCTGTAGTACTTCATCAACAGGGGAGAGCTTGAAGAACATTGCTACAGCTACAGAGATATGCCAATCGAGCCGGCTCAAGGCTTTTCTCAGGAAGCAGGGAAAGTTATCTTCGCTTTGTGTCAATCAAGGCTGCTCTATTACTTTTCAAAATTTCACCGAAATTGCTGGTGAGCCAATTGAAGCAGAGAGGTTATATGATGTTGTTAATGTCGTGCTCTCATTGCAGATAATAAATCCAGCGGAAACTTTTGGTGATATAGTTGCAACTTGGAGCAAGCATGGTGAAAAAGTCAAGTTGCTACTGTTGTTTGGAGACCATGTTATCAGTGTTGATATTCGTGGCAACATGTTCTTGTGGGCATTTAAGGGAATGTGGATTTTGCATTTTCTCCCTGCAAGCGTTGATCAACAAAGTAGAGAGCTTTCTCAGAACAATGTTTCTAGACGAGCCAAGAAACTTAAAGTAAAGGAAGAAGAAATAAAGTTGAAGCCCGTGATTGCATTTGATTGTGTGGGGAATCCAGCCTTAAAGGAAAGTTGGGATGATGAAGAAGAAGCAGCAGCAGAAAGAGCAAGTGAAGTGAAATTTTGCAGATGA 1248 0.4479 MHSLSIEDVTSSAVAAAAAAAARSHELLPPPLSMRLLFSSSHELSRPCSCLTSSLRRRSRAASSLLAGGLSSSLLVAVSSAAIDFGDFFKGPLPGKFLKLLGFLALSRLGVYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFTEADMQKLSHALKVISKNQRTWFTAALLQLSAEEYPPADATDDKLYLKGATNRDGDFCSTSSTGESLKNIATATEICQSSRLKAFLRKQGKLSSLCVNQGCSITFQNFTEIAGEPIEAERLYDVVNVVLSLQIINPAETFGDIVATWSKHGEKVKLLLLFGDHVISVDIRGNMFLWAFKGMWILHFLPASVDQQSRELSQNNVSRRAKKLKVKEEEIKLKPVIAFDCVGNPALKESWDDEEEAAAERASEVKFCR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2351 415 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 71 112 - -
Amo19g2351 415 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 71 112 IPR002208 GO:0015031|GO:0016020
Amo19g2351 415 Gene3D SecY subunit domain 104 188 IPR023201 -
Amo19g2351 415 SUPERFAMILY Preprotein translocase SecY subunit 109 157 IPR023201 -
Amo19g2351 415 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 111 161 IPR002208 GO:0015031|GO:0016020
Amo19g2351 415 Pfam SecY 110 165 IPR002208 GO:0015031|GO:0016020
Amo19g2351 415 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 111 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2351 Amo-Chr19 107699594 107703499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2351 77 161 Chloroplast and Mitochondria Gene Families AT2G18710 50.694 1.37e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2351 K10956 - ahf:112776403 236.113