Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2328 ATGCAACAACATATAGATCGTACGTATTTGAAGGTTTTGAAGATAGTGATGGCAAATTTGTTGGTAATTGTTTTGGTGATTCATCAAGTGATGGCAAGTGGATACAGAATGGGAGCAAATGGCTTAGACATGAACTATTACTTGATGGGTTGCCCTTTTGTTGAGCCTGTCGTTAAGAACATTGTCAATAGGGCTTTGCAACGTGATCCCACTCTTGCTGCTGCTCTTATTAGAATGCATTTCCATGACTGCTTCATTCAGGGTTGTGATGGGTCAATCCTAATTGACTCCACAAAGGACAATACAGCAGAAAAGGATTCACCAGGGAATTTGAGCCTTAGAGGATACGAAGTCATTGATGAAATCAAGGAAGAACTTGAAAGACAATGTCCTGGTGTTGTTTCGTGTGCTGATATTCTTGCTATGGCGGCTAGGGATGCTGTATTCTTTGCTGGAGGTCCAATCTATGACATACCAAAAGGGAGAAAGGATGGAAGAAGGTCGAAAATAGAGGATACTATAAATCTTCCATTCCCAACCTTCAATGCCTCTGAGTTGATTAAGGCTTTTGGGCAACGTGGTTTTTCTGCTCAAGAAATGGTCGCTCTTTCCGGGGCTCACACATTAGGAGTGGCAAGATGTGCTTCTTTCAAGAACAGATTGAACCAAGCTGACCCAACATTGGACTCACAATTTGCCAAGACACTCTTTAGGACATGCAGCTCCGGCGACACGACAGAGCAGCCGTTCGATGCAACAAGGAACGACTTTGACAACTTGTATTTCAATGCTCTGGTGAGGAAGAATGGTGTTCTCACGTCAGATCAAACCCTCTATGCTAGCCCTTTAACAAGGAACATTGTGAATGCCTATGCATTTAACCAAGCCATGTTCTTCTTTGATTTCCAACAAGCAATGGTCAAAATGGGCCTCATTGATGTCAAAGATGAATCCAAGGGTGAAGTGCGACAAAATTGTCGCAGAATACTTTAA 993 0.426 MQQHIDRTYLKVLKIVMANLLVIVLVIHQVMASGYRMGANGLDMNYYLMGCPFVEPVVKNIVNRALQRDPTLAAALIRMHFHDCFIQGCDGSILIDSTKDNTAEKDSPGNLSLRGYEVIDEIKEELERQCPGVVSCADILAMAARDAVFFAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIKAFGQRGFSAQEMVALSGAHTLGVARCASFKNRLNQADPTLDSQFAKTLFRTCSSGDTTEQPFDATRNDFDNLYFNALVRKNGVLTSDQTLYASPLTRNIVNAYAFNQAMFFFDFQQAMVKMGLIDVKDESKGEVRQNCRRIL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2328 330 Gene3D Peroxidase, domain 2 178 310 - -
Amo19g2328 330 ProSiteProfiles Plant heme peroxidase family profile. 41 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 CDD secretory_peroxidase 41 329 IPR033905 GO:0004601|GO:0042744
Amo19g2328 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Amo19g2328 330 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Amo19g2328 330 Gene3D - 45 327 - -
Amo19g2328 330 Pfam Peroxidase 58 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PANTHER PEROXIDASE 47 35 328 - -
Amo19g2328 330 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PANTHER PEROXIDASE 25-RELATED 35 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 SUPERFAMILY Heme-dependent peroxidases 41 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2328 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2328 Amo-Chr19 104978610 104989503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2328 14 329 Peroxidase AT4G33420 70.886 2.12e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2328 K00430 - gmx:100776019 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g3279 05 94986662 94987833 Amo19g2328 19 104978610 104989503 PCT
Amo19g2328 19 104978610 104989503 Amo05g3279 05 94986662 94987833 PCT