Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2296 ATGAACCCTAGATCTACTAGCCGCCGCGTCATCAAGCTCGCCGTAGCATCTGAGATTAGAGGGAGAGTAACCGGCGATGCCTGCGACGCCATCCTTGCCGAGGTCCAAGAGCAGTTTCCATCCTTAACTCCACTTTCTCATGGAAGGAGTCAGATCGAGCCGCCGCTAAGCGCGCCACTCACGCGCTCGCCGATCTTGCCAAAAACGCACCTCCAAGCTCCTCCCGTGACGGAAGAAGAACTCGTTCAGAAGCTGTTGCTGTTTGAGCATGAGGTTGAGAAAGTGAGTGCTTTTGCACTTGGACTTCTTGCCACTGTGGAAAAGAATCTAAAGGGTTCCAGAGAGAAGCAACAATTCTCCACAGTCTTCAATAACTTCTATGTCCGCTATTTGCACATTTCTAGAACAATTTCTGCTTATGAGAGCTTGACTCTTCGAGGTTATGATGTTGTTACTATTGTTTTGGAAGATCACGACCTTCTAAAAGAGGGTCGAATAATGTCTTATATGCGGAACAAGATAAGCTATTATGATCTCTACTTATATACTGTTGTTCACTTCTTCATGCAGGCTTCCTATTCTAGTGCTACCCCCTGTTCCAAAAGGCCTTATTGGAGGTGTTACTTTCCAAATACTCAAGCAATAATCTATGTTGTTRATTCAAGTGATACCGATAGGCTTGTGASAGCTAAGGAAGAGTTCCATGCTATTCTGGAGGCTGACTCTGAAGTTCACATACACTGGAAAGGTGCTATTGAAATTGTCCTAGCCTACTGTACACAGTACATTGATGCAAATGACCAGTTGGTAGACATGGATGAGGAAAAGGATCCTTGTCGACCTGGAGTCAAAGATTCAGTGGAGCTTTGCCAAAAATATGGGGTTAAGGTTGTGAGACGGGGACGTTCTGTTGTATGCAAATATTCAGAAATTATCACATTGGCAACTGAACCACCAACTGACCATCTTATGGATTGGGCCCGAAGGTCGGAACTTCAG 999 0.4515 MNPRSTSRRVIKLAVASEIRGRVTGDACDAILAEVQEQFPSLTPLSHGRSQIEPPLSAPLTRSPILPKTHLQAPPVTEEELVQKLLLFEHEVEKVSAFALGLLATVEKNLKGSREKQQFSTVFNNFYVRYLHISRTISAYESLTLRGYDVVTIVLEDHDLLKEGRIMSYMRNKISYYDLYLYTVVHFFMQASYSSATPCSKRPYWRCYFPNTQAIIYVVXSSDTDRLVXAKEEFHAILEADSEVHIHWKGAIEIVLAYCTQYIDANDQLVDMDEEKDPCRPGVKDSVELCQKYGVKVVRRGRSVVCKYSEIITLATEPPTDHLMDWARRSELQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2296 333 PANTHER ADP-RIBOSYLATION FACTOR 1 198 257 - -
Amo19g2296 333 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 241 275 IPR023299 GO:0000166
Amo19g2296 333 Gene3D - 132 191 IPR027417 -
Amo19g2296 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 241 IPR027417 -
Amo19g2296 333 Pfam ADP-ribosylation factor family 201 243 IPR006689 GO:0003924|GO:0005525
Amo19g2296 333 PANTHER ADP RIBOSYLATION FACTOR-RELATED 198 257 IPR024156 GO:0005525
Amo19g2296 333 Gene3D - 198 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2296 Amo-Chr19 103352745 103356969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2296 236 288 Primary Pumps ATPases AT4G29900 50.943 1.94e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2296 K07942 - aip:107615060 93.9745