Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2246 ATGATGCTAGAGAACAGAGGAGTTGGCAGAAAACCTCTTGATTGGAATGCAAGGCTAACTATCATCAAAGACATAGCAAAAGGTGTTGATTTCCTTCATCATTCCTTGGCATCTCACAAGGTCCCCCATGGCAACCTCAAATCATCCAATGTCCTAATTCATCATCATGATAACCAAGGTAACCACCATGCGAAGCTCGCTAATTTCGGCTTCTTGACTTTACTTCCTAACAAGAAATCAGCAGAGAAACTGGCCATAAGCAAGTCACCAGAATTTGTTCAAGGGAGGAAGCTAACACATAAGACTGATGTGTATTGCTTTGGAATAATTGTGCTTGAGGTCATAACTGGGAAAATTCCTGGTGAAATGTTGGGGGGAATGGGAATGGAAGAAGAAGAAGAAGAAAAAATAAGTGATCTTTCAGATTGGGTGAGAATGGTGGTCAACAATGATTGGTCAACAGATATTCTTGATATTGAGATGATAGCTGCGAAAGAAGGACATGATTCAATGTTGAAGCTAACACAGATAGCTCTTGAGTGCACTGATGATAAGCCTGAGAAGAGGCCTAAGATTAGTGAAGTTTTGAGGAGAATGGAAGAGATTGAGAAAACGAAAAATGGGAATTTGATTAGCTGA 639 0.4022 MMLENRGVGRKPLDWNARLTIIKDIAKGVDFLHHSLASHKVPHGNLKSSNVLIHHHDNQGNHHAKLANFGFLTLLPNKKSAEKLAISKSPEFVQGRKLTHKTDVYCFGIIVLEVITGKIPGEMLGGMGMEEEEEEKISDLSDWVRMVVNNDWSTDILDIEMIAAKEGHDSMLKLTQIALECTDDKPEKRPKISEVLRRMEEIEKTKNGNLIS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2246 212 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2246 212 SUPERFAMILY Protein kinase-like (PK-like) 11 200 IPR011009 -
Amo19g2246 212 Pfam Protein tyrosine and serine/threonine kinase 11 198 IPR001245 GO:0004672|GO:0006468
Amo19g2246 212 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 205 - -
Amo19g2246 212 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 4 205 - -
Amo19g2246 212 Gene3D Transferase(Phosphotransferase) domain 1 2 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2246 Amo-Chr19 98239672 98240514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2246 5 202 Receptor kinase-like Gene Family AT1G68400 37.879 2.58e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo19g2246 Pkinase 1.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2246 - - ahf:112709229 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2246 19 98239672 98240514 Amo19g2246 19 98239672 98240514 ECH