Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2245 ATGAGCTTGAACCTTATGGTTCTATTATTGTTAGTGTCATTGAACATGTTATCATGTGATGAATTGAAGGAAGAAAAGAAAGCTTTATTGGTAATAAGGGATTCTTTAAGTTCTTCTGCCAATTTGCATGAGAATTGGACAGATTCTCCTTGTATAGGAAATCAAAGTAGATGGAAAGGTATCATTTGTTCAAATTGGCATGTTGTTCAAATAATCCTTGAAGATTTCAATCTTAGGGGTTCATTGCCTTCTACCTGTTTGCAAAAAGTACCTTTCTTGAAACACCTTAACTTGGGAAACAATTCAGTTCTTGGTTTGCTTCCTAATCTCACAAACTTGGTATTTTTGGAACAAGTTTTGCTTTCATATAATCATTTCTCAGGTCCAATCCCTTTGGAATATGCTCATGGATTGCCTAACCTGAAAGTGTTGGAGCTGCAAGAGAATTACTTGGATGGTCAAATTCCATCCTTTGATCAACCAGCACTGACGAGTTTCAATGTATCGTATAATCATCTTTGGGGGACAATTCCTGAAACTTCGGCCCTGCAGAGGTTCTCTGATAGCTCCTTTGATAATAATTCTGATCTATGTGGGAAGTCATTGGATAAGTTGTGTCCTTCTTCACCTCCTGCTGGCCCATCTTCTGCGCCATATCCTTCTGTTATTCCTCAAGGCTCTGCAGCAGCAAAACACGAGCATATCGACCAAGTCAGAGTGATCGTTTTGATTGTTGCTTCAGGAGCAATTTTGCTTCTTGTGATAATATCTATTTTCTTGGTTTACAATAAAGGAGTGCCTGAAAAAGAAGCAAGAAATGGTGCATCAGGGTATACTTTTGGAGCTTGGGCAAGAAACATAGTTTCTGAAAATGAAGATTATGAAAGATTAGGCAGAATGGAATATTTCAGCAAGGAATTAGCAGCTTTTGACATAGATGATTTATTAAGGGCATCAGCAGAAATGCTAGGGAAAGGTAATTTGGGCATTACATACAAAGCTACCCTTGAAACTGGCATTGTTCTTGCRGTAAAGAGACTTAGTCACATGAATGAGTTAAGCAGAAAGGAATTTACAAAGCAGATGCAAGTTCTTGGGGAGTTGAAACATGAGAATTTGGTAGAAATTATCTCATTTTATCACTCAGAGGAGCAAAAGTTGATCATACATGAGTTTATCTCAAATGGCAGCTTATTTGACCTCCTACATGGTTAG 1215 0.3778 MSLNLMVLLLLVSLNMLSCDELKEEKKALLVIRDSLSSSANLHENWTDSPCIGNQSRWKGIICSNWHVVQIILEDFNLRGSLPSTCLQKVPFLKHLNLGNNSVLGLLPNLTNLVFLEQVLLSYNHFSGPIPLEYAHGLPNLKVLELQENYLDGQIPSFDQPALTSFNVSYNHLWGTIPETSALQRFSDSSFDNNSDLCGKSLDKLCPSSPPAGPSSAPYPSVIPQGSAAAKHEHIDQVRVIVLIVASGAILLLVIISIFLVYNKGVPEKEARNGASGYTFGAWARNIVSENEDYERLGRMEYFSKELAAFDIDDLLRASAEMLGKGNLGITYKATLETGIVLAVKRLSHMNELSRKEFTKQMQVLGELKHENLVEIISFYHSEEQKLIIHEFISNGSLFDLLHG* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2245 404 Gene3D Ribonuclease Inhibitor 23 136 IPR032675 -
Amo19g2245 404 ProSiteProfiles Protein kinase domain profile. 317 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2245 404 Gene3D Ribonuclease Inhibitor 137 202 IPR032675 -
Amo19g2245 404 SUPERFAMILY Protein kinase-like (PK-like) 321 403 IPR011009 -
Amo19g2245 404 SUPERFAMILY L domain-like 24 183 - -
Amo19g2245 404 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 403 - -
Amo19g2245 404 Pfam Leucine rich repeat N-terminal domain 23 64 IPR013210 -
Amo19g2245 404 Gene3D Phosphorylase Kinase; domain 1 283 392 - -
Amo19g2245 404 Pfam Protein kinase domain 321 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2245 404 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 8 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2245 Amo-Chr19 98233046 98237957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2245 23 404 Receptor kinase-like Gene Family AT2G36570 31.944 1.71e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo19g2245 Pkinase 5.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2245 - - gmx:100788386 431.795