Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2240 ATGGTTAAATCATGCTGGAAACCATTGGTGGAAGGCGAAGATAATGGAGATGGCGGTGGGAGTAGTAGTGGGAGAGTTGATGGGTTGTTGTGGTACAAAGATTTGGGGTACCATCTTCATGGTGAATTCTCAATGGCTGTGATTCAAGCAAATAACTCATTGGAAGATAGAAGCCAAGTTGAATCTGGACCTTTGAGTTCCAACCACCATTTGGGTCCTCATGGAACCTTCATAGGTGTATACGATGGTCATGGTGGAAACGAAGCCTCACAGTTTGTTAGTGACAATCTTTTCTCTAATCTCAAGAGGTTTGCAGCTGAAAATCAAAGCATATCAGAAACCGTTATAAAAAAAGCATTCTCAGCAACAGAGGATGGTTTTTTGTCTCGAGTTAAGAAACAATGGCTAACTAAGCCGGAGATTGCATCCACAGGAACTTGTTGCTTGGTTGGAATAATCTGCAACGGCATGCTTTACATCGCAAACTCCGGCGACTCGAGGGCGGTGCTAGGTAGATTAGAGAGACAAACAAGAGAAGCATCTGCTGTTCAATTATCCGTCGAACATAATGTTAATCAAGAAACTGTTAGAGATGAACTTCGTTCAAAGCACCCCTTTGATTCACAGATTGTGGTTATGAGACACAATGTTTGGCGTGTAAAAGGACTCATACAGGTTTCAAGATCCATTGGTGATGCATATCTGAAGAAAGCAGAGTTCAATAGAGATCCTCTGCCATCTAAGTACAGACTAGCTGAGGCATTCTTCAAGCCAATTCTTAGTTGTGAGCCATCAATATCGGTGCACAAACTCCACCCTGATGACCAATTCCTCATATTTGCTTCTGATGGTTTATGGGAGCACCTTGGCAACCAAGAAGCTGTTAGCATAGTCAGCAACAACCCACCTAATGGAATTGCAAGAAGACTAGTGAAAGCTGCACTAAGAGAAGCAGCAAAGAAGAGAGAAATGAGATTTGCAGACCTCCAAAAAATTGAACAAGGAGTAAGGAGACATTTTCATGATGATATAACAGTGATTGTTGTGTTTCTCAATCCCAAACTTATTGATACAAGCTCTCCATTAGGTTCTCCTCTTTCAATCAAGGGAGGTGAATTCTAA 1122 0.418 MVKSCWKPLVEGEDNGDGGGSSSGRVDGLLWYKDLGYHLHGEFSMAVIQANNSLEDRSQVESGPLSSNHHLGPHGTFIGVYDGHGGNEASQFVSDNLFSNLKRFAAENQSISETVIKKAFSATEDGFLSRVKKQWLTKPEIASTGTCCLVGIICNGMLYIANSGDSRAVLGRLERQTREASAVQLSVEHNVNQETVRDELRSKHPFDSQIVVMRHNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPSKYRLAEAFFKPILSCEPSISVHKLHPDDQFLIFASDGLWEHLGNQEAVSIVSNNPPNGIARRLVKAALREAAKKREMRFADLQKIEQGVRRHFHDDITVIVVFLNPKLIDTSSPLGSPLSIKGGEF* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2240 373 SUPERFAMILY PP2C-like 49 352 IPR036457 -
Amo19g2240 373 CDD PP2Cc 43 351 IPR001932 -
Amo19g2240 373 SMART PP2C_4 34 349 IPR001932 -
Amo19g2240 373 Pfam Protein phosphatase 2C 70 320 IPR001932 -
Amo19g2240 373 Gene3D - 35 359 IPR036457 -
Amo19g2240 373 PANTHER ALPHABET, ISOFORM E-RELATED 3 371 - -
Amo19g2240 373 ProSiteProfiles PPM-type phosphatase domain profile. 39 351 IPR001932 -
Amo19g2240 373 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Amo19g2240 373 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2240 Amo-Chr19 98142040 98146485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2240 1 371 PP2C-type Phosphatase Gene Family AT3G55050 63.342 2.06e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2240 K01102 - gmx:100814123 598.586