Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2233 ATGAAGCCCCAATCGGAAAACCACTCTACAGAACCCAGGAATCTGGGCCACTCTTCAAGTGCCAACTTCAATGGAATCAATTTTGGTGAAGTTGAAGCCAAGCACCGAATGCTTTTGGTCCAGTGGCTAAATAGTCTTCTTCCAACGTTGAACTTGCCGGTAAATATCACAGATGATGAGCTAAGAGTATGCTTGAACAATGGTACAATTTTATGTCAAATAATGAACAAGCTACGACCTGGTTCAGTAAGTGAGGTCAGTGAATTTGATAATTCTCCGTCAGCAAAGTCAGAGAATGTTAAGAGATTCCTGAAAGCCATAGATGCATTGGGCATGCCCAAGTTTGAAATATCAGACCTAGAGAAGGGCCATATGAAGTCTGTTGTGGATTGTCTTTTAACACTTAGAGCCAAAAGTTTACAGAATGCTTGGGGAGACAATATTTCTATGACTAATTCCAAAGTCAGATCCATCATGAGTTCACCTTCATCACATGGGGGTGATCAGAGGAAGAATCCATCAGAGTCAAAGTTCCAAAGTGTTTTGCGTAGTCCGGTTATGGCTGAGCCATCGGCTGCATTATTACACCATGTAGGTCATAAATTTCATGAGGTGTTTCAAATGAAACACGGAAGCTATGCTGAACTTCCTGCTGCAAAAATCTCAGAACTGATGAAATCTACCAGTTTAAATAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAACGCCATTTTGGAAGAAAGTGTTGAAAGAAGAAATAGTGAAATACCCCATCGTGTGGCTGTCTTGTTGAGAAAAGTTGTCCAGGAGATTGAGCGGCGCATATCGACTCAAGCAGATCATTTAAAAACACAAAACAATCTTTTTAAGGCTCGCGAAGAAAAGTATCAATCAAGAATTAGAGTACTTGAGGTTCTTGCTTCTGGAGCAAGGGAAGACAATGAGGTTGGGGTTCGAAGCCCTATTCGGCAACAGCAACAGACTGCAGTTACAAGTGCAATCGTGCAGTCAAAGGAACAGAGTGAGGTGACTAAAATGGAAGAAAAGAAGGCTTTTGAATCAATACAGTCTGAAAAGGCTAAAGAGGAGACAAAGACGGAAGATAACCAAGAGGTAATTCGGTTGATGAAAGAGCTGGAAAATAAAAACACAGACATTTCAAAATTGAAGCAAGAGCTCGAAATAATGAAGAAAGGTAGCCAAGATGTTACTAGCTCTGTGAAAGAGATGGAAGATAAAAACATGGAAATTTCGGTGGAAWTTTCGGCATTGAAACAAGAAGTAGGAACAATGAAGAGTGATGACCAAGATTCACAAGAATATGAGCATCAGTTGGAATCATTAAGTAATAAGATTAGAGAGAATGAGGCCTCTTATGAGTCTGAATATCAAAAGTGGAACCTAAAAGTTATCCAATTTCAGAAAGCTACAACTTTTCAGCTTAGTTCAATAAAGGTCTTGAAATTGTCTTGGGAAACTGTTAAGCAGCATGTGCTAAATGAGCAACCATTTTATGCAGAAGAGTTTAAGCGATTAGGTGTAAATCTTAAACCATTGGTAGATGCAGCTGAGAACTATCAGGTAGTTCTTGCGGAAAATCGGAAGATGTTCAATGACATTCAAGAATTAAAAGGAAATATTAGAGTATATTGCAGAGTTAGACCATTTCTCCCAGGACAAAAGGAGAAACAATCTATTGTGGAACACTATGGTGAAACCGAGTTGGTTGTGGCAAATCCTTCCAAACAAGGGAAAGAAGCCCTTAGAACATTTAAGTTTAACAAGGTCTTTGGTCCAAGTGCAACTCAAGCTGATGTATACAATGACATTCAAGCCTTTATACGATCAGTACTCGACGGGTACAACGTATGCATATTTGCTTATGGCCAAACTGGTTCTGGGAAAACTTACACAATGAGTGGTCCAAATGGTGCAACAGCTGAGAGTGTTGGTGTTAACTATCGAGCTTTGAATGACCTTTTCAGCATAGCGACTACCAGACAGAGCACCATTTCCTATGAAATTGGGGTTCAAGTGATTGAAATATACAATGAACAAAATTTTTATTTGTTTTTTTCTTCCTTACATGGTTTCCTTCATTTGCACACGGTTGGGATATTGACTCACTCCCAACCAAATGGCTTAGCAGTACCTGATGCTAGCATGCAACTTGTAAAATCAACCGGGGATGTCATAAAGCTGATGGACATTGGCCTGAAAAATAGAGCCAAAAGTGCAACTTCTATGAACGAAAGAAGTAGCCGTTCTCACAGTGTGGTATCGATTAATGTTCGTGGAGTAGACATGAAGTCTGGTTCTACTCTTCAAGGCAACCTTCATTTGGTTGATTTGGCTGGAAGCGAGAGGGTAGATCGGTCTGAAGTGACTGGTGATCGACTTAAGGAAGCACAGCATATCAACAAATCACTATCTGCCCTTGGAGATGTCATCTTTGCTCTTGCTCAAAAGAATGCTCATGTGCCATACAGAAATAGCAAGCTTACTCAACTTCTGCAATCTTCCCTTGGTGGTCATGCAAAGACACTCATGTTGGTACAAATCAATTCAGACGTAAAGTCATATTCCGAATCTCTAAGTACTTTGAAGTTTGCTGAGAGAGTTTCTGGTATTGAGTTAGGAGCTGCGAAAAGTACCAAAGATGGGAAAGATGTCAGAGAATTAATGGAGCAGGTGGCTTCTCTAAGGGACACTATTTTGTCAAAAGATGAGGAGATTGAGAGGCTGCAATTACTTAAAGATCTGAAATCTGACAAGCCTACCCCAGAATAG 2793 0.401 MKPQSENHSTEPRNLGHSSSANFNGINFGEVEAKHRMLLVQWLNSLLPTLNLPVNITDDELRVCLNNGTILCQIMNKLRPGSVSEVSEFDNSPSAKSENVKRFLKAIDALGMPKFEISDLEKGHMKSVVDCLLTLRAKSLQNAWGDNISMTNSKVRSIMSSPSSHGGDQRKNPSESKFQSVLRSPVMAEPSAALLHHVGHKFHEVFQMKHGSYAELPAAKISELMKSTSLNNAPTQSLLSVVNAILEESVERRNSEIPHRVAVLLRKVVQEIERRISTQADHLKTQNNLFKAREEKYQSRIRVLEVLASGAREDNEVGVRSPIRQQQQTAVTSAIVQSKEQSEVTKMEEKKAFESIQSEKAKEETKTEDNQEVIRLMKELENKNTDISKLKQELEIMKKGSQDVTSSVKEMEDKNMEISVEXSALKQEVGTMKSDDQDSQEYEHQLESLSNKIRENEASYESEYQKWNLKVIQFQKATTFQLSSIKVLKLSWETVKQHVLNEQPFYAEEFKRLGVNLKPLVDAAENYQVVLAENRKMFNDIQELKGNIRVYCRVRPFLPGQKEKQSIVEHYGETELVVANPSKQGKEALRTFKFNKVFGPSATQADVYNDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATAESVGVNYRALNDLFSIATTRQSTISYEIGVQVIEIYNEQNFYLFFSSLHGFLHLHTVGILTHSQPNGLAVPDASMQLVKSTGDVIKLMDIGLKNRAKSATSMNERSSRSHSVVSINVRGVDMKSGSTLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKNAHVPYRNSKLTQLLQSSLGGHAKTLMLVQINSDVKSYSESLSTLKFAERVSGIELGAAKSTKDGKDVRELMEQVASLRDTILSKDEEIERLQLLKDLKSDKPTPE* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2233 930 SMART ch_5 35 138 IPR001715 GO:0005515
Amo19g2233 930 SMART kinesin_4 545 886 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo19g2233 930 Gene3D - 402 447 - -
Amo19g2233 930 Gene3D - 368 401 - -
Amo19g2233 930 PANTHER KINESIN-LIKE PROTEIN KLP-3 372 920 - -
Amo19g2233 930 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 328 - -
Amo19g2233 930 Gene3D - 28 140 IPR036872 -
Amo19g2233 930 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 372 920 - -
Amo19g2233 930 Pfam Calponin homology (CH) domain 36 136 IPR001715 GO:0005515
Amo19g2233 930 SUPERFAMILY Calponin-homology domain, CH-domain 34 136 IPR036872 -
Amo19g2233 930 CDD CH 39 140 IPR001715 GO:0005515
Amo19g2233 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 916 IPR027417 -
Amo19g2233 930 MobiDBLite consensus disorder prediction 155 181 - -
Amo19g2233 930 ProSiteProfiles Calponin homology (CH) domain profile. 33 140 IPR001715 GO:0005515
Amo19g2233 930 Coils Coil 892 912 - -
Amo19g2233 930 Coils Coil 432 459 - -
Amo19g2233 930 Gene3D Kinesin motor domain 542 919 IPR036961 -
Amo19g2233 930 PRINTS Kinesin heavy chain signature 748 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo19g2233 930 PRINTS Kinesin heavy chain signature 621 642 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo19g2233 930 PRINTS Kinesin heavy chain signature 828 849 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo19g2233 930 PRINTS Kinesin heavy chain signature 779 797 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo19g2233 930 ProSiteProfiles Kinesin motor domain profile. 547 878 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo19g2233 930 Pfam Kinesin motor domain 553 877 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo19g2233 930 Coils Coil 363 400 - -
Amo19g2233 930 MobiDBLite consensus disorder prediction 155 182 - -
Amo19g2233 930 Coils Coil 408 421 - -
Amo19g2233 930 Coils Coil 423 428 - -
Amo19g2233 930 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 3 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2233 Amo-Chr19 97509803 97517153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2233 360 878 Calmodulin-binding Proteins AT5G65930 33.521 4.03e-66 240