Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo19g2198 | ATGAGGTTACTGATGGGGACTGAACTCATGAGAATATGTGTTAAAGAAGATAATGATGAGTTTCCTTCAGTACCACCTGGTTTTGAGTCATATACATCTTTCTCGCTGAAAAGGGTAGAAGACAATGAGAAACAAAATGATAAAAATATTACCAGTTCTTCAGTATCCACAAGTGCGTCTGAATCAAATTCGACACAGGTGGTTACCAATATTCAAGTTAGTGATACTGCAAAAGTTCCTAGGACGCTGAGACGCAGACCTTGGATTAATTATGGACAATATGAGAATAGTTATGAGGAAGACTCTGATTGTGAGCGGCTTGATCAAAATTTCTCCTCAAGACCTTGTCTTCCCAGGGGAGTTATCCGTGGTTGTCCAGATTGCAGTAATTGCCAGAAGGTTGTTGCAAGATGGCGACCAGAAGATGCTCGTAGGCCAAAGCTTGAGGATGCTCCTGTTTTCTACCCCACAGAAGAGGAGTTTCAAGATACTTTAAAATATATATCGAGCATTCGCTTCAGTGCTGAACCATATGGAATTTGTCGCATTGTTCCCCCTTCTTCTTGGAAACCCCCTTGTCCTCTCAAGGAAAAAAGTATATGGGAGGGTTCTAAATTTGCTACCCGTGTTCAGAGGATTGATAAACTTCAGAATCGTGAATCAGTGAGAAAGATTTCAAGGTTTCAAAGCAATATGAAAAGGAAAAGGAGAAGGGTCACAAGAATGGGAATGGAAAATGGCACTGTTGGAGGACTGGACATGGGACTTTGTGAAGCTGAAAGTTTTGGGTTTGAACCTGGTCCACAATTTACCTTGGAAACATTTCAGAGATATGCCGATGATTTCAAGGATAAATACTTCAGAGAAAATGAGAATGTGTCTCATTTGGGAACCAATACAACAAATTTAAACAGCACCTTTGAGCCTTCTGTGGAAAACATTGAGGGTGAATATTGGCGGATGGTTGAGAGTCCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGATCTGGAAACAGGGGTTTTTGGGAGTGGTTTTCCTAGAAATTCTAGTAATGTTGGTTCCACGTCACATGAAGATTATATAAAGTCTGGCTGGAATTTAAATAACTTTGCGAGGTTACCTGGATCCTTGCTCTGTTATGAAAGCAGTGATATATCTGGTGTTCTAGTGCCATGGTTGTACATAGGAATGTGCTTTTCCTCCTTTTGTTGGCATGTGGAAGACCACCATTTGTATTCCTTGAATTATATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGCAAAGATGCTTGCAAATTGGAAGAAGCCATGAGGAAGCATTTACCAGAACTATTTGAAGAACAACCTGACTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCCATCCTTAAGTCTATGGGAGTGCCAGTTTATAGGTGTGTTCAAAACCCGGGAGAATTTGTTCTGACATTTCCTCGAGCCTATCACTCTGGCTTCAATTGCGGCTTCAACTGTGCAGAGGCTGTTAATGTGGCTCCAGTTGACTGGCTGCCGCATGGGCATATTGCTATAGATCTGTATAAGGAGCAGCGGCGCAAGACTTCTATATCCCACGATAAGCTATTACTGGGGGCTGCAAGGGAAGCTGTAAGAGCCCAGTGGGAGCTTAATTTGCTGAAAAGGAATACTTCTGATAACCTACGATGGAAAGATGTCTGTGGAAAGGATGGTCTTCTAGCAAATGCACTCAAGACACGTGTTGAGATGGAGCGAGTCAGAAGGGATTTTCTATGTAATTCGTCACAAGCATTAAAAATGGAGAGTAACTTTGATGCTACAAGTGAAAGGGAATGCAACATTTGCTTTTTTGACTTACACTTATCTGCAGCTGGTTGTCGATGTTCCCCTGATAGATATGCTTGCTTGGATCATGCAAAGCAGTTTTGTTCATGCTCTTGGGATTCCAAATTCTTCCTCTTTCGCTATGATATCAGTGAATTAAATATTCTTGTTGAGGCATTGGAAGGAAAACTAAGTGCTGTATACAGATGGGCAAAATTAGATCTTGGGCTTGCACTGACTTCTTATATTTCAGCAGACAAGGAAAAAGTACTCAAGGAATTGAGATTTCAGTCATCAAACTTGTCTCATTCTCCCAAGGCCAATGTGCATAAAGAGGCGACTTTGCATCAATCAAATGAATTTGTTGAAGACACACAATTAATGGATATCCCAATAGTGGATCAATCAAATTCAGAAAAAGGCAAAGATCAGAGCTTCCCTCAACAAAGGAAATCTGTAGAAGTTGTGTCTCCTTTGAGTCAGAAGAAGGAACGCTTGACACTTGATAATGTACAACCTGCAAATGAGATGGGTAACCGTAAGACTTTTGTCAATAAAGAAGGATCTGCTAATTGCAGAATAAAGCTGAGTCGCCTTGGTTGCCAAACATCTCAAGAAGATTTGTCATTTGTTCTATGTCTTCCTGTGGCTCAGGCTGAGCATGGAGGAGGGAAAAGTTCACTACACAGACGTAACAGTAGTATTATACATCCTAGTGAAGATAAAGTTGATGACATGAAGCCAGATACCAATGGACGGAAGGAGCTTTCTCAAATAGATAAAGCAAGTTCATGTAATAATATGGAAAATACTAAGTTGATCATCCGGATGAAAGATCCTGCCATTATGGGTGACAAGGAAGCTATTACATTTCCCCAAGCAGATAAGAGTTCTGATTCAACTCAGCTTTTGCATGTTAAACAGGAATGCGAAGAAAACAGGGAACCAGCAATAGCTTCTACCCTGATAGATCTTTCTTGTCAAGTTGGTCTTACTGCTGCAGAATCAATTAGAAGTATTCCTGACTCTTTAACTGCAGAGACCAGCAACCGTTGCCAGGAAAGTTCTCTGAGTTCTCTAAATCCACAACATTCTGTCATCACCAAGGTTAAGAATGAGGATACTCAAGAAAAGCTTGGCGGGTGTAGCACTTCTAGTATAGCAGAGAGCGTAAGAGCTGTTAATGGAAACACATGCAGTCTTAACAATTACCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTCCGGCGTATCAACTGCAATGTTGAGCCTTTAGAATTTGGAGTTGTGCTTTCTGGAAAGTCATGGTGCAGCAGTCAGGCTATATTTCCAAAGGGATTTAGAAGCCGTGTTAGATACATAAATGTCTTAGACCCATCGAATATGTGCTATTACATTTCAGAAATTCTTGATGCTGGACATGACAGGCCTCTGTTTATGGTTTCCTTGGAAAATTGTCCAAGTGAGGTCTTCGTTCACATTTCAGCTGCAAGATGCTGGGAACTAGTAAGAGATAGAGTGAACCAAGAGATTGCAAAACAACATAAGCTGGGAAGGAAGGGTCTTCCTCCTTTACAGCCTCCCGGAAGCCTTGATGGCTTTGAAATGTTTGGGTTTTCTTCACCCGCCATAGTGCAGGCTATTGAGGCACTGGATAGAAGTCGAGTCTGTAGTGAATACTGGGATTCTCGGCCATATTCTCGGCCTCAAGGGCAGATTTCACAACCTCGCCAAACCAATTCAAATGGTGGAAATGGTCAAGGGGTTCTTGTGAATCAGCACTTGCCCAATGGTGGTGTTGCAGCATTACAGAGCTTATTTAGAAAGGCCAATGCTGAAGAATTGAACTCACTGTACAGCATTTTTAGTGATAAGCCAGAGGCTGATCGGAACCTAATCACGCGTCTTCTAAATGAAGAGATTCACAAATCACAACCGTCTTAG | 3780 | 0.4169 | MRLLMGTELMRICVKEDNDEFPSVPPGFESYTSFSLKRVEDNEKQNDKNITSSSVSTSASESNSTQVVTNIQVSDTAKVPRTLRRRPWINYGQYENSYEEDSDCERLDQNFSSRPCLPRGVIRGCPDCSNCQKVVARWRPEDARRPKLEDAPVFYPTEEEFQDTLKYISSIRFSAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFATRVQRIDKLQNRESVRKISRFQSNMKRKRRRVTRMGMENGTVGGLDMGLCEAESFGFEPGPQFTLETFQRYADDFKDKYFRENENVSHLGTNTTNLNSTFEPSVENIEGEYWRMVESPTEEIEVLYGADLETGVFGSGFPRNSSNVGSTSHEDYIKSGWNLNNFARLPGSLLCYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSMGVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIDLYKEQRRKTSISHDKLLLGAAREAVRAQWELNLLKRNTSDNLRWKDVCGKDGLLANALKTRVEMERVRRDFLCNSSQALKMESNFDATSERECNICFFDLHLSAAGCRCSPDRYACLDHAKQFCSCSWDSKFFLFRYDISELNILVEALEGKLSAVYRWAKLDLGLALTSYISADKEKVLKELRFQSSNLSHSPKANVHKEATLHQSNEFVEDTQLMDIPIVDQSNSEKGKDQSFPQQRKSVEVVSPLSQKKERLTLDNVQPANEMGNRKTFVNKEGSANCRIKLSRLGCQTSQEDLSFVLCLPVAQAEHGGGKSSLHRRNSSIIHPSEDKVDDMKPDTNGRKELSQIDKASSCNNMENTKLIIRMKDPAIMGDKEAITFPQADKSSDSTQLLHVKQECEENREPAIASTLIDLSCQVGLTAAESIRSIPDSLTAETSNRCQESSLSSLNPQHSVITKVKNEDTQEKLGGCSTSSIAESVRAVNGNTCSLNNYRQKGPRIAKVVRRINCNVEPLEFGVVLSGKSWCSSQAIFPKGFRSRVRYINVLDPSNMCYYISEILDAGHDRPLFMVSLENCPSEVFVHISAARCWELVRDRVNQEIAKQHKLGRKGLPPLQPPGSLDGFEMFGFSSPAIVQAIEALDRSRVCSEYWDSRPYSRPQGQISQPRQTNSNGGNGQGVLVNQHLPNGGVAALQSLFRKANAEELNSLYSIFSDKPEADRNLITRLLNEEIHKSQPS* | 1260 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo19g2198 | 1259 | Pfam | JmjC domain, hydroxylase | 393 | 509 | IPR003347 | - | |
| Amo19g2198 | 1259 | MobiDBLite | consensus disorder prediction | 749 | 768 | - | - | |
| Amo19g2198 | 1259 | PANTHER | JUMONJI 14-RELATED | 81 | 760 | - | - | |
| Amo19g2198 | 1259 | PANTHER | JUMONJI 14-RELATED | 982 | 1256 | - | - | |
| Amo19g2198 | 1259 | MobiDBLite | consensus disorder prediction | 1177 | 1202 | - | - | |
| Amo19g2198 | 1259 | Pfam | F/Y rich C-terminus | 1088 | 1172 | IPR003889 | GO:0005634 | |
| Amo19g2198 | 1259 | Gene3D | - | 1033 | 1170 | - | - | |
| Amo19g2198 | 1259 | Pfam | F/Y-rich N-terminus | 1039 | 1081 | IPR003888 | GO:0005634 | |
| Amo19g2198 | 1259 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 982 | 1256 | - | - | |
| Amo19g2198 | 1259 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 81 | 760 | - | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo19g2198 | - | - | gmx:100800271 | 2007.26 |
Showing 1 to 1 of 1 entries