Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2183 TGGTTATCTATTCCCCACAATGTTATTTCCCCTGCAAAATCTACCTTTAATTTACCATTGCAAGATTACTCCTTCAAACTAGTATTTCCAACTCTTCCGAGAATGCCAAACCTCAAAAAAACGATGACAACACAACCCAAACTTCCTCTCGTAATAGCATGGGAGCCCGAGCCTGCCATGAGCCCATACATTCCTGCCATAGCTAGCTTCACACGATGCAAGAACACATGCCTCTGCATCCTTTCTGGTTTTGGAATCATTTCCAACATCATGCTTCGTCAACCGTCCAATGCCACCTCCCCCGGCGCCACTGTTACGTTCTACAGCTGCTTCGAAATACTATTCATCTCCGCACTTCTGTCCCTCACTCGCTGCCGCCTCCGGTTCCGAATTTGTTCTCCATCTCGCTCGCCGGGCCTCAGGACCAGATCGTCAGAGGACTTGTCGCCGGCAAGCTAA 459 0.4902 WLSIPHNVISPAKSTFNLPLQDYSFKLVFPTLPRMPNLKKTMTTQPKLPLVIAWEPEPAMSPYIPAIASFTRCKNTCLCILSGFGIISNIMLRQPSNATSPGATVTFYSCFEILFISALLSLTRCRLRFRICSPSRSPGLRTRSSEDLSPAS* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2183 152 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 45 119 - -
Amo19g2183 152 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 119 IPR014476 GO:0003680
Amo19g2183 152 SUPERFAMILY AF0104/ALDC/Ptd012-like 66 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2183 Amo-Chr19 93828256 93828752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2183 14 118 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 36.522 5.18e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2183 - - gra:105770466 83.1889