Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2118 ATGGTTGATTGCCTGAATTGCTTCCCGTGTTTTAGCTCTCAGAAAAGTAAAAAGAGTAATAGCAAGAGGGAAGGGTCTCCTGCGGAAGATAATTTTGTTGCAAAACCACCTGATATGAAAAATAAAAGACCTGAAGATGCAGCCGCAATTGATCCTGCAAACATAAAGGCAAAACATTACACATTCCGTGAGCTGGCAACAGCAACAAAGAACTTCCGTCAAGAATGCCTCCTTGGTGAAGGAGGCTTTGGCAGAGTCTACAAGGGCGTCATCCCTGCTACCGGCCAGACTGTGGCTGTGAAGCAACTTGACCGAAATGGTATGAATGGCAATAAGGAGTTTCTGGCTGAGGTTTATACGCTAAGTCAGTTGAACCATGAAAACATTGTCAACCTCGTTGGTTATTGTGCTGATGGTGATCAACGTCTATTGGTGTATGAGTTCGTTCAAGGCACTGCTCTAGACAAACGTCTTCTTGAGAACAAAGGGGATCAACCTCCACTAAATTGGTACACCAGAATGAAAGTGGCAGCGTCGGCGGCGAGAGGGCTAGAGTACTTGCATGACAATGCCAATCCTCCAATAATATTCAAGGACTTGAAACCCTCTGATATACTGCTGGATGGAGACAATAATGCTAAGCTGTTTGGTTTTGGTCTGGGACAGCATGGAAATGACATGAACCTTGCACCTACAAGGGTTATGGGAACTTATGGTTACTCTGCTCCTGAGTATGTCAGGACGGGTCAACTTACCATGAAGTCTGACGTCTACAGTTTCGGGGTAGTATTGCTTGAGCTCATAACTGGACGCCAAGCGGTCGACACCACAAGGCCAAATGATGAGCAAAACCTTGTTTCTTGGGCACAACCCATATTCAAAGATCCAAAGAGATTTCCGGACATGGCAGATCCAAATCTTGGCAAAAACTTCCCAGAAAAGGATCTGAACCAAGCTGTTGCAATAGCAGCAATGTGCTTACAAGAGGAAGCCGAAGCGCGTCCTTTGATGAGCGACGTTGTCACTGCTCTGAGTTTCCTTTCCACTGTTCCTCCTCCGGGGGCTGTGCCGACTCCAAAGGCCCCCTCGGTGGCCTCCAAAAAGAACTCTAAAGGCAAAGAAGACCATAGCAAAAGCGAAAGCGAAAGGGAAAGCGAAGGTGAAAGCGAAAGTGAACGAGGAAGCCTCACTGGAAGCGAGAGCTCTTACTCCCGTGCAAGTAGCAGGAGAACAATGAGTAGAACATACACTTCAGATTCAGATGGAAGCTATTCCGCTAGCAGCTATCAGAGCGAAAGCAGCATCCCTGACCACAAAGCAAGCACCAAGATAACAAGCAGAAAGCATTCTTCTAGAGACGCCAGCAAAAAGCATAGCAGCAGAAAACATTCTACCAAAGATATAAGCAAGAAGAGCACAAAGAAACCCTCTCTTGTTGAAAAGGGCGACAAAAAATCCTCTGAATTGAGGAAGAAGAGCACCAAGAAATCGTCCAAGGCTTCCGGCCACAAGAGCAGCAAAAAAACCTCTCTGAAAATCTTGAGCCAAAAGAGTAGCAAAAAGTCGGAAGATGAAAGCATCTCCATTAGCAGAAATAGCAGCAGCAGCGTGATCTCGGCCGACGAGATACTGGAGCACATGGGAAGCAGGGAATACGGGAATATATCTTTTGGTCTCATAAGCAGCGAGAGTATTACCAGCAACAGATCTGAAGATTAA 1719 0.4613 MVDCLNCFPCFSSQKSKKSNSKREGSPAEDNFVAKPPDMKNKRPEDAAAIDPANIKAKHYTFRELATATKNFRQECLLGEGGFGRVYKGVIPATGQTVAVKQLDRNGMNGNKEFLAEVYTLSQLNHENIVNLVGYCADGDQRLLVYEFVQGTALDKRLLENKGDQPPLNWYTRMKVAASAARGLEYLHDNANPPIIFKDLKPSDILLDGDNNAKLFGFGLGQHGNDMNLAPTRVMGTYGYSAPEYVRTGQLTMKSDVYSFGVVLLELITGRQAVDTTRPNDEQNLVSWAQPIFKDPKRFPDMADPNLGKNFPEKDLNQAVAIAAMCLQEEAEARPLMSDVVTALSFLSTVPPPGAVPTPKAPSVASKKNSKGKEDHSKSESERESEGESESERGSLTGSESSYSRASSRRTMSRTYTSDSDGSYSASSYQSESSIPDHKASTKITSRKHSSRDASKKHSSRKHSTKDISKKSTKKPSLVEKGDKKSSELRKKSTKKSSKASGHKSSKKTSLKILSQKSSKKSEDESISISRNSSSSVISADEILEHMGSREYGNISFGLISSESITSNRSED* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2118 572 MobiDBLite consensus disorder prediction 350 539 - -
Amo19g2118 572 Gene3D Phosphorylase Kinase; domain 1 36 148 - -
Amo19g2118 572 SUPERFAMILY Protein kinase-like (PK-like) 58 366 IPR011009 -
Amo19g2118 572 MobiDBLite consensus disorder prediction 17 48 - -
Amo19g2118 572 ProSiteProfiles Protein kinase domain profile. 72 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2118 572 PANTHER RECEPTOR KINASE-LIKE PROTEIN 7 565 - -
Amo19g2118 572 MobiDBLite consensus disorder prediction 13 48 - -
Amo19g2118 572 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Amo19g2118 572 MobiDBLite consensus disorder prediction 470 495 - -
Amo19g2118 572 Pfam Protein kinase domain 74 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2118 572 MobiDBLite consensus disorder prediction 450 469 - -
Amo19g2118 572 CDD STKc_IRAK 78 344 - -
Amo19g2118 572 Gene3D Transferase(Phosphotransferase) domain 1 150 348 - -
Amo19g2118 572 MobiDBLite consensus disorder prediction 367 393 - -
Amo19g2118 572 PANTHER OS07G0668900 PROTEIN 7 565 - -
Amo19g2118 572 MobiDBLite consensus disorder prediction 394 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2118 Amo-Chr19 85343099 85346243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2118 5 409 Glycoside Hydrolase AT3G07070 56.563 4.56e-157 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Amo19g2118 Pkinase 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2118 - - lang:109335196 526.168