Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2111 CAAAAGCGTGGCCATAGAGGGAAACAGCCCGCTCTCAACTTGCAACCCTCTATCCTTCTCTCGCAACCCTTTATCTCTCTTTCTCAACTCTTGGAAACTTCAATCGGTGTTGCCTCCGTCGGCGCACCCTCCATTGGCGCGCCCTCTGTCAGCGCTCACTTTCGCTCGCAAGGCCTCCATTGGCGCTTGCTCTCTCCCGCTCAAATCTTACCTCCGTTGACATTGACTGAATCATCGCTACCTCTCCCTCAATCGGCGCTCAACCCTCACTATAACACAAGAAGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAAACAAGTCAAGGAGTGAAACTCAATTCTGATCAGATAGGGTTGCATCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCTCTCAAAGCTGTAGAAGCCATTCCTCAAACCAAAAGGCCTTTAGCAGCACTGTCTCCGGAGGATCTCACACATACAGAATGGTACTATTTGGTTTGC 510 0.4961 QKRGHRGKQPALNLQPSILLSQPFISLSQLLETSIGVASVGAPSIGAPSVSAHFRSQGLHWRLLSPAQILPPLTLTESSLPLPQSALNPHYNTRRVLSWGEGYYNGDIKTRKTSQGVKLNSDQIGLHRSEQLRELYKSLKAVEAIPQTKRPLAALSPEDLTHTEWYYLVC 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2111 170 PANTHER TRANSCRIPTION FACTOR TT8 94 170 - -
Amo19g2111 170 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 92 170 IPR025610 -
Amo19g2111 170 PANTHER TRANSCRIPTION FACTOR EGL1 94 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2111 Amo-Chr19 84799595 84800925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2111 96 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 64.198 9.49e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2111 - - aip:107615590 157.147