Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2100 ATGACATTCATGAAAGGAATATGGAAATCAATGTTGCCGGGATGTTACAAAGGAGAGTACCCATCAAGAAAGCCGAAGAGAGTGGTTTCGACGAAGCCAATATGTTCGCAGAGGATATCAGTGAGTGACTTGAGCTTCCCAAGCACAACATTCTCGGAGGATCTGTCGATGTCGCTGGCGGGAACAAACCTGCATGTCTTCACGCTGGCTGAGCTCAAGCTCATCACTCAGCATTTCTCGTCCAGTAACTTCCTTGGCGAAGGCGGGTTCGGACCGGTTCACAAGGGCTTCATTGATGATAAGCTTAGGCATGGCCTTAAGCCTCAGCCTGTTGCTGTTAAGCTCTTGGACTTGGATGGCTCCCAAGGCCATAAAGAGTGGTTGACTGAAGTGGTTTTCCTGGGTCAACTAAGGCATCCACACCTTGTGAAGCTGATTGGATATTGCTGTGAAGAAGATCATAGGCTTTTGGTATATGAATACTTACCAAGAGGCAGCTTAGAAAATCAACTATTTAGAAGATTCTCAGCATCATTGCCCTGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTTTAACCTTTCTCCATGAGGCAGAGAAGCAAGTCATCTATAGAGATTTCAAAGCTTCAAACATATTGTTAGACTCTGATTACAATGCAAAACTATCTGATTTTGGGTTAGCAAAGGATGGTCCTGAAGGAGATGACACCCACGTTTCAACTCGTGTTATGGGAACCCAAGGCTATGCTGCCCCGGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGACGTGTACAGCTTTGGGGTAGTATTGTTAGAGCTTCTAACAGGAAGAAGATCAGTGGACAAGAGTAAGGTACCAAGGGAACAAAACCTTGTGGAATGGGCAAGGCCAATGCTCAATGACCCAAGAAAACTTGGAAGGATAATGGACCCTAAACTTGAAGGGCAGTACTCTGAAATGGGATCAAGAAAGGCTGCAGCATTGGCCTACCAATGCCTTAGCCATAGGCCCAGGAACAGGCCCACTATGAGTGCTGTTGTTAAGGTTCTTGATCCCCTTCAGGACTTTGATGATATTCCAATTGGGCCCTTTGTGTATACCGTTCCTAATGAAAGTAATAATAATAATAATAGTGGTGTTGAATCTTCTTTTTCTCCTTCTCCTTCTCCTAACAAGGAGAAGAAAAGTGGACATCATCATCATCATCGTCATAGGCGACCACATCCGCTTGCTAAATCACCTAAGTCACCAAGGCCACATTCACATTTAAATTCAGAGAATGAGAGACACCACACGAATAGAAGATCATCATCAAGTGAATCAGATTCTCCACCTTCGCATACATAG 1365 0.4447 MTFMKGIWKSMLPGCYKGEYPSRKPKRVVSTKPICSQRISVSDLSFPSTTFSEDLSMSLAGTNLHVFTLAELKLITQHFSSSNFLGEGGFGPVHKGFIDDKLRHGLKPQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEDHRLLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLTFLHEAEKQVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKSKVPREQNLVEWARPMLNDPRKLGRIMDPKLEGQYSEMGSRKAAALAYQCLSHRPRNRPTMSAVVKVLDPLQDFDDIPIGPFVYTVPNESNNNNNSGVESSFSPSPSPNKEKKSGHHHHHRHRRPHPLAKSPKSPRPHSHLNSENERHHTNRRSSSSESDSPPSHT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2100 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Amo19g2100 454 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 24 394 - -
Amo19g2100 454 MobiDBLite consensus disorder prediction 376 454 - -
Amo19g2100 454 MobiDBLite consensus disorder prediction 425 443 - -
Amo19g2100 454 MobiDBLite consensus disorder prediction 376 397 - -
Amo19g2100 454 SUPERFAMILY Protein kinase-like (PK-like) 64 391 IPR011009 -
Amo19g2100 454 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2100 454 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
Amo19g2100 454 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Amo19g2100 454 PANTHER OS01G0588500 PROTEIN-RELATED 24 394 - -
Amo19g2100 454 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Amo19g2100 454 MobiDBLite consensus disorder prediction 400 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2100 Amo-Chr19 84005675 84008963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2100 65 356 Glycoside Hydrolase AT3G07070 53.220 8.48e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo19g2100 PK_Tyr_Ser-Thr 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2100 - - gmx:100797003 706.827