Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2086 ATGTTCAAGCCTGTTCGAAGAAATGGCGGAAGAAACAAGCATGGTCGCGGCCATGTCAAATTCATCCACTGTTCCAATTGCGGCAAGTGCTGCCCTAAGGACAAATCAATCAAGCGGTTCCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTTCGTGATGTTCAGGAAGCCTGTGTCTATGAGCAATACACTCTTTCGAAGCTGTACGTGAAAATGCAATATTGTATTTCTTTTGAGGGTGCATTTTTGCACCGATAG 258 0.4496 MFKPVRRNGGRNKHGRGHVKFIHCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLSKLYVKMQYCISFEGAFLHR* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2086 85 Pfam Ribosomal protein S26e 6 78 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo19g2086 85 PANTHER 40S RIBOSOMAL PROTEIN S26 6 78 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo19g2086 85 PANTHER 40S RIBOSOMAL PROTEIN S26 6 78 - -
Amo19g2086 85 Gene3D Ribosomal protein S26e 3 83 IPR038551 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2086 Amo-Chr19 81926751 81927384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2086 6 77 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 83.333 2.65e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2086 K02976 - gmx:100808790 146.362