Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2052 ATGCTTGAGCACAATGTTGGTGGGTTTCGATTTGACCAGAGAGAGGTAGTTCATAGTTTCAAGCTTGATCCTTGTGTTCAAAGAGTTTTATCAGCAAGACGAGCTTTGAGGGCGTTGAGGGCAATGGTGAGGCTGCAGGCTATATTTCACAGAAGGCTAGTGAGGAAGCAAGCTGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTGAAGCTCGCGTCCGCACTAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCCGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATTAAGGAGGCTGAGGAGTATGAGGGTGGTTGTTGTTCTGTCTTTGCTGAGGTTGATGGTGTACCTGTGTCACTTAATTAG 387 0.4755 MLEHNVGGFRFDQREVVHSFKLDPCVQRVLSARRALRALRAMVRLQAIFHRRLVRKQAAVTLRCMQALVRVEARVRTRNVRNSPEGKAVQTLLDQYRNQADPIKEAEEYEGGCCSVFAEVDGVPVSLN* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2052 128 PANTHER IQ-DOMAIN 5-RELATED 26 99 - -
Amo19g2052 128 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 26 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2052 Amo-Chr19 78456492 78457552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2052 28 108 IQD Protein Family AT1G72670 56.790 9.06e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2052 - - ahf:112710157 131.724