Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2050 ATGGTCTTCCTGAGTCTATTGTTGGTAACCAAAGTTGTTATCCCAATTTCCTTTCTTCTGTGGCTAATGCTATATCAGCAAAAAGCATGTTTCATGGCAACTCATGCAGATTTTGTTGTATCTTATAAAAAGTATGCCAAAAGCATCAAGAATCCGGAACATGAATCAATCTTCTTACCTTGCAGGTGTACTAGTGGTATAGTGACTGGAATGAGTGATTTGGATCCATACAGATGGCCTAAATCAAAATGGAGGTGCTTAATGGTCTTGTACCTTAAACTTATTTACTTTTTGACTGGTTACAAACTGATTTGGAAGAGGAAAAGGCACATGAAATTGCCAAGTTACAGGATGCTTTGCATGCAATACCCCAAATCGAAAGTCACTGGAACTAGACCAGATGTTGAGATGAGAAATGGAAAAGTTTAA 429 0.3753 MVFLSLLLVTKVVIPISFLLWLMLYQQKACFMATHADFVVSYKKYAKSIKNPEHESIFLPCRCTSGIVTGMSDLDPYRWPKSKWRCLMVLYLKLIYFLTGYKLIWKRKRHMKLPSYRMLCMQYPKSKVTGTRPDVEMRNGKV* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2050 142 Gene3D - 48 93 - -
Amo19g2050 142 PANTHER AUXIN RESPONSE FACTOR 32 91 - -
Amo19g2050 142 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 32 91 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2050 Amo-Chr19 78396901 78397801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2050 33 89 B3 DNA Binding Superfamily AT5G60450 51.515 8.81e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2050 - - ahf:112706773 103.605