Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2046 GCCAGTGAGCTATACTGTCGACAGAGTGAACCTAACACAAACCCTAATCCTAAATTCACTTTTTCCCTCCTGAATTTCGGAGTTTCCATGGCGAAGCAAAAGCAAGTCGCTCCTCTTGAAGACTCTGACGACGACGAATCGCAGGTTCCCAGACCTCAGCCCGAACAAGAAGATAGCAGCGAGGAAGAAGAAGCAGCAACTTCATCCGACGAGGACGAAGACACCGACGAAGGCGAAGATGAACGTGAGAAACACGTGCTGGTTCCCAGGAAGCCTCAACCGCAAATGGTTTCGAAACCCTCGTCGTCTTCTTCTAAACCCTCTCCAAAGTTGAAGTCTCAACCTTCGGCTTCTGTTAGTCAAACCAAATCCGGGTCAAAGCGCGCAGCCGAGAACAGTATCGACCACTCGAACCAACCAAAACGTGGGAAGAAGGCACAGGAGGATCACGCCGTCGGCTCCGTTGAAGAGGATCCGCAGAAATCACGTGACGAGTTCAAATCCCTCTTTCAGAGGGTTTTCAGCGAGGAAGATGAGATAGGTATCTTGAAAGGCCTGTCTGAATTCATCGCAAAAACAGGAAAGGAACCCTATAAATGCGCTGATGAATTTTACGATTTTATGAAGGGGTCGAATTTGATTCGGGCAAATGTATCATGCAACCAATTGAAGGATAAGATCCGCCGGCTGAAGAAGAAGTTTGAGAACAACCTAGAAAAAGAGAAGAACGGCAAGGGGACAACCTTAAAGCCGCACGAGTTGGAAGCACTTCAGTTGGGAAAGAATGTTTGGGGCCACGATGGCCGTGGCGGTGAAGCAGTGCGCAACGAAACTGCGAAAAAGGATACAGTTAATAATGAGAAGGCTGCGAAGAGTACTCCCAAGAAGGCGCTAGTGCCCCATTCAAATGGGAAAGCTGAAGCAAAGTCCAAACTAAATTCTGAACCTTTGGATACAAATGAAGGTAGAAGGATGAGTGAATTTTCTGTGACTAGTTTAGCTTTGACTTCAATGTTGAGGTACGATGGGACTTTTGGTAAGCCTTTCGGTGAAGATTATATTAGAAAGGGAATAGAGTTGCTTGGAGTCTCAAAGAGGGAAGACATCGAGGCTAGGTGGAGGAAGTTCAAAGACGCTGAAAATAAATTGTATGCAGAGATAGCTGAATTCTACGCGGAACAGGCTAAGTTGATATATCAAGCAAATAGCTCGTCGTCCTCCTAG 1224 0.4673 ASELYCRQSEPNTNPNPKFTFSLLNFGVSMAKQKQVAPLEDSDDDESQVPRPQPEQEDSSEEEEAATSSDEDEDTDEGEDEREKHVLVPRKPQPQMVSKPSSSSSKPSPKLKSQPSASVSQTKSGSKRAAENSIDHSNQPKRGKKAQEDHAVGSVEEDPQKSRDEFKSLFQRVFSEEDEIGILKGLSEFIAKTGKEPYKCADEFYDFMKGSNLIRANVSCNQLKDKIRRLKKKFENNLEKEKNGKGTTLKPHELEALQLGKNVWGHDGRGGEAVRNETAKKDTVNNEKAAKSTPKKALVPHSNGKAEAKSKLNSEPLDTNEGRRMSEFSVTSLALTSMLRYDGTFGKPFGEDYIRKGIELLGVSKREDIEARWRKFKDAENKLYAEIAEFYAEQAKLIYQANSSSSS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2046 407 MobiDBLite consensus disorder prediction 37 56 - -
Amo19g2046 407 MobiDBLite consensus disorder prediction 265 324 - -
Amo19g2046 407 MobiDBLite consensus disorder prediction 134 164 - -
Amo19g2046 407 Pfam Protein of unknown function, DUF573 170 265 IPR007592 GO:0006355
Amo19g2046 407 MobiDBLite consensus disorder prediction 268 289 - -
Amo19g2046 407 MobiDBLite consensus disorder prediction 95 133 - -
Amo19g2046 407 Coils Coil 213 244 - -
Amo19g2046 407 PANTHER STOREKEEPER PROTEIN 47 402 - -
Amo19g2046 407 PANTHER BNAANNG10740D PROTEIN-RELATED 47 402 IPR007592 GO:0006355
Amo19g2046 407 MobiDBLite consensus disorder prediction 32 164 - -
Amo19g2046 407 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2046 Amo-Chr19 78273848 78276135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2046 170 402 GeBP Transcription Factor Family AT1G61730 30.043 1.87e-19 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Amo19g2046 DUF573 1.3e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2046 - - adu:107458074 571.237