Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2039 ATGTTTAAGGAGAGTCGCAAGCTTCTGCTAGGTCCATACGTCTTTGTTGATAAATACAAAGTATACAATCTTTGTTCTGAACGGCTGTATGATGCATCATTGTTTGAGGGAAAGGGTAACTCAAGAGCTTCTCTTCATCTTTATATTCATGTTTGGACGGCAAATCCTTCTTCACGGGGCATCTACCTGAGGGAGGCTACTGCTTTCCAACAATCTACTGAGACATGCTACTTTTGCATTTGTCTTTACCAGCTAGGTCTCAGCTTGGACCAAGGGAAAGGAGCCGATGGAGCAGCAGCACCAGGAGTAGGCTTCTTGAAGCCACCGGAAGAGGCCTCCGGTAGCGGCAAGCGCTTTCGCGACGACGTCCTTGATGCCAGAGCTAAGAATGTTTTTCATGGCCAACCAATGCCTACTACTATTCCGGCAGCTCCACATCCTCCAACAATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGACCCACACAGCATAGCTGAACGGGGCGGGGGGGCGGCAGAAAGAATCAGGGCTCTACAAGAACTGGTTCCAAGTGTCAACAAGGTATGTAACTGCTCTAATGCAGTTTGTGATCCTCTTTAA 609 0.4893 MFKESRKLLLGPYVFVDKYKVYNLCSERLYDASLFEGKGNSRASLHLYIHVWTANPSSRGIYLREATAFQQSTETCYFCICLYQLGLSLDQGKGADGAAAPGVGFLKPPEEASGSGKRFRDDVLDARAKNVFHGQPMPTTIPAAPHPPTMRPRVRARRGQATDPHSIAERGGGAAERIRALQELVPSVNKVCNCSNAVCDPL* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2039 202 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 78 191 - -
Amo19g2039 202 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 78 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2039 Amo-Chr19 76162473 76166230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2039 78 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 63.333 3.17e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2039 - - ahf:114924986 206.453