Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2024 ATGGTTGGTGAAGGTAGCTTTGGCTGTGTATTTAAGGGCTGGATCGACGAGCACACTCTTGAACCCATAAAACCGGGCACCAGACTCATCATTGTGATAGAAATCAACTACTTGGGTCAGCTGGATCATCCTAATCTTGTGAAACTCATAGGTTACAGCTTAGAAGATGATCACCGGATTTTGGTGTATGAGTTTTTGACTATAGGCAGTTTGGATAACCATTTGTTTAGGAGAGCTTCTTATGTTCGCCCGCTTTCTTGGAACATACGCATGAATATTGCTCTTGATGCAGCTAAAGGCCTTGCATTTATTCACAGCGACCAAGTAGATGTAATATACCGAGACTTGAAGACTTCTAACATCTTTCTTGATTCGCCAGTATGCTTTCATGGATTTCCCCCATTTTTTTCAGTGTCAAGGTCACGCAAGCATGTGTTGTTTTGGATTAATAAAAGGGGAGCAGATGTTGACAGCTTTACGCATTCAGTGTTGCCTCCTGATAATGGTATTGGGGAAGTTGCTCAGGACTTTGCTTTAGCCCAAGTCAATGGTCTATGGTGA 561 0.4242 MVGEGSFGCVFKGWIDEHTLEPIKPGTRLIIVIEINYLGQLDHPNLVKLIGYSLEDDHRILVYEFLTIGSLDNHLFRRASYVRPLSWNIRMNIALDAAKGLAFIHSDQVDVIYRDLKTSNIFLDSPVCFHGFPPFFSVSRSRKHVLFWINKRGADVDSFTHSVLPPDNGIGEVAQDFALAQVNGLW* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2024 186 Pfam Protein kinase domain 2 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2024 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2024 186 Gene3D Phosphorylase Kinase; domain 1 1 65 - -
Amo19g2024 186 PANTHER KINASE 1B 2 125 - -
Amo19g2024 186 SMART serkin_6 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2024 186 Gene3D Transferase(Phosphotransferase) domain 1 67 145 - -
Amo19g2024 186 SUPERFAMILY Protein kinase-like (PK-like) 2 127 IPR011009 -
Amo19g2024 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 111 123 IPR008271 GO:0004672|GO:0006468
Amo19g2024 186 PANTHER OS01G0588500 PROTEIN-RELATED 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2024 Amo-Chr19 74361925 74364407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2024 1 125 Receptor kinase-like Gene Family AT5G56890 42.105 1.57e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo19g2024 Pkinase 2.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2024 - - gmx:100305440 213.001