Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2020 AGTCAAACAGTGGATATTGGTGGCAATTCAGAGGACGTGACATTAGACATGGGAATGGAAGATGTTGAGACAACTGGTGTAGCATTGAAGCAGATGCGGGAAAATGGCAACACGTCTGTTGAAGGAATTTCTTTAACTGTGGATGATATTCTACAGATGGAGTTTAATGATCCTAAGCAGGTAGCACGTTTGTACGAGGAGTACAGCCGTGTGAGAAGTTTTGGTAGCCGACAAGAGAAGAAAATAAGAAATAAGAAAGGTGAATTTGTGCGATTCACTTATCTGTGCAACCGTGAAGGCTTTAGAGATAAGAAATGGCTTCAGATGCATCATCTTAAACGGGAGCATAAGGTTGTTATTAGGTGCAGGTGTCCAGCTGAGATGCGGATAAAACCAAGAGATAACACCGGCAAATGGTATGTGTCACGTTTTGTGGACAATCACAACCATGATCTTCCACCTGCCAAGTTTGTTGAGTACTTGCCTTCACACCGTAAAATTTCAGATGTTGACATAGCCCATATGGATAGCATGAGACAAGTTGGGATATCAGTTCCAAAAATATATGAGTCGATAGCTGCACAGGCTGGTGGTTTTAATCAAGTTTCATTTACTAAGCGAGACATGTACAACGAACTTGGTCGCTTTGTCAAGAAGAGATACGGTGTCCTTGAGTTTGTCACAAACTTCCAGCGATGTGTTGATTTCCTCAGAGACAATAAGGACGAGCTTGAGTTTCGTTCATCGTATGGCACTGTCATTCAGACTCAGTTTCCAGAGTTAGAAAAGTCAGGTGCGCTGTGTTATACAACATAA 816 0.4203 SQTVDIGGNSEDVTLDMGMEDVETTGVALKQMRENGNTSVEGISLTVDDILQMEFNDPKQVARLYEEYSRVRSFGSRQEKKIRNKKGEFVRFTYLCNREGFRDKKWLQMHHLKREHKVVIRCRCPAEMRIKPRDNTGKWYVSRFVDNHNHDLPPAKFVEYLPSHRKISDVDIAHMDSMRQVGISVPKIYESIAAQAGGFNQVSFTKRDMYNELGRFVKKRYGVLEFVTNFQRCVDFLRDNKDELEFRSSYGTVIQTQFPELEKSGALCYTT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2020 271 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 167 - -
Amo19g2020 271 Pfam FAR1 DNA-binding domain 64 152 IPR004330 -
Amo19g2020 271 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 21 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2020 Amo-Chr19 74063540 74065157 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g2020 FAR1 2.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2020 - - adu:107486709 308.145