Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2017 ATGCAGAAATCGCAGAAATCGCTCCGTTTCGATCTTGTCTCAACTGTGCAGGTAACCCTGATCTCTTCCACACCTTTATCACTCTTAGTATTCGCTGCTACACTGACACCAGCCTCTCCTCCTATTCGCCATTTTCCATCGAGCTTTTCTGCATCTCGTCCGATTCACCACCTCTCCTCGAAATTTGCAGCGCGCTGCTGTCGTTTTCCTTCTTGCACTTCTGGATCTGCTACCACTCATAGAATTTCCTGTTCCAGAATATCGAGAATCTATCCTCAGATTCGGTTAATTTCTGAACTTATCACTTTCATAAAAACTGCTTATAATTTTTTCATCATTTTGCTCAAAACTTGCTTACAAGAAGCCCATGACAAGTCAAGATCTGTTACCAAGGCTCCTGCCATGAAGGGTCTTTGTTTGGCTATTGCCATTGTTCAGTTGTACATTTTTCCTGATAAGGCCTTAGAGCTTGGAATCATAAACAGCCGCCATGAAGCCTTCATCACTTCCAAACTTTGGTGCAACAATGCTCACCATGACCTTGTCCTTCTAGCTCTCAAGACCACACTCAAGAAACTTGGGTTGGACTATTTAGACCTCTACTTGATTCATATGCCAGTGGAAATGAGCTCATCATGGCAACAAGGGAAACTCAGAGAATTTTACAAGCAGAAAGGAATCCATTTGGCTGCATGGTCACCATTAGGATCTTACACAAAATCATGGGGTACTAATTCAGTTATGGAGAGTCCAATCATTAATGAAATAGCCACTTCTAGACACAAGAGTGTGCCTCAGGTTGGTTTCATATTCTTCCGGCTACAAAATCTTGCTCTGTTAAATTTGGAAGGCTGCTTTGTAACAGCTGCATGCTTGGATACTCTTGCAGCGCCTATTGCTGTCATTCTTCTTTCTTGGATTAACTGGGTAAGATTCTTGATGATATTTGGCAACCAGCTTTTGTTTCTTATGGGTTTAAGCTATACTAATCCAACATATGCTTCTGCCACGCAGCCAGCAATTCCAGTCTTTACGTGGAGTGGGACTGTTTCTGCTGTTGTTTCAGAGGGGAGCGCAGTTGGCACAAGTTTTTCTGCGACTGAAGTCTTCAAACTGACAAAATGTATTCATCTTCTCTCTGTCTGA 1146 0.4258 MQKSQKSLRFDLVSTVQVTLISSTPLSLLVFAATLTPASPPIRHFPSSFSASRPIHHLSSKFAARCCRFPSCTSGSATTHRISCSRISRIYPQIRLISELITFIKTAYNFFIILLKTCLQEAHDKSRSVTKAPAMKGLCLAIAIVQLYIFPDKALELGIINSRHEAFITSKLWCNNAHHDLVLLALKTTLKKLGLDYLDLYLIHMPVEMSSSWQQGKLREFYKQKGIHLAAWSPLGSYTKSWGTNSVMESPIINEIATSRHKSVPQVGFIFFRLQNLALLNLEGCFVTAACLDTLAAPIAVILLSWINWVRFLMIFGNQLLFLMGLSYTNPTYASATQPAIPVFTWSGTVSAVVSEGSAVGTSFSATEVFKLTKCIHLLSV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2017 381 SUPERFAMILY NAD(P)-linked oxidoreductase 160 272 IPR036812 -
Amo19g2017 381 Gene3D - 210 281 IPR036812 -
Amo19g2017 381 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 207 269 - -
Amo19g2017 381 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 152 209 - -
Amo19g2017 381 PANTHER ALDO/KETO REDUCTASE 207 269 - -
Amo19g2017 381 PANTHER ALDO/KETO REDUCTASE 152 209 - -
Amo19g2017 381 Gene3D - 151 209 IPR036812 -
Amo19g2017 381 PRINTS Aldo-keto reductase signature 203 232 IPR020471 GO:0016491
Amo19g2017 381 PRINTS Aldo-keto reductase signature 247 271 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2017 Amo-Chr19 74002920 74006212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2017 315 346 Nodulin-like Gene Family AT3G45870 81.250 5.34e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2017 K22374 - aip:110264999 112.079