Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2010 ATGTTCAAATTTTTGAAAGAGGTAGTGGGTGGATCTGGGACAGGGTTGAAGGATCTGCCTTACAACATCGGCGAGGCTTACCCTTCCGCTTGGGGCTCTTGGGTTCATCACCGCGGCACCAACAAGGATGACGGGTCTCCGGTATCAATCTTCTCTCTGACTGGGAGCACCGCCCAGGATGGGCATTTAGCGGCGGGTCGAAATGGTGTCAAGCGACTCCGAACTGTTAGGCATCCGAATATCTTGTCATTTCTTCATAGTACCGAAGTCGAAACCTATGATGGCAGTTCTCCCAAGGTTACCATCTACATTGTGACTGAACCTGTGATGCCACTTACGGACAAGATTAGGGAGCTAGGCCTTGAAGGTACACAAAGGGATGAGTACTATGCTTGGGGTTTGCACCAAGTAGCTAAAGCTGTGAGCTTCTTAAATAACGATTGTAAACTTGTTCATGGTAATGTTTGCATGGCTAGTGTTGTCGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCGGAGTTTGATGGGAATAATGAAACTTCATCTACCTCAATGCTGCAATATGCATGGCTTGTTGGGGCACAATACAAACCAATGGAGCTGGTAAAATCGGACTGGGCTGCAATTAAGAAGTCTCCTCCGTGGTCCATTGATTCCTGGGGCATGGGTTGTCTAATCTATGAGATATTCTCTGGCACGAGATTGGGAAAAACAGAGGAGTTGCGCAACACAGGCTCCATTCCAAAGTCTCTGCTTCCAGATTACCAGCGACTACTGAGTTCCATGCCTTCTCGTAGATTAAATACTTCAAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTTGATACAATACATTTCATGGAAATTCTGAGTTTGAAAGATAGTGTTGAAAAAGACACCTTCTTCCGCAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTCCAATTGTATTGAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCACTTTTGAAAATGGGTTCCTGGCTTTCTGCTGAGGAGTTTCGTGTCAAGGTGCTTCCAACAATTGTTAAACTATATGCCTCTAATGACCGATCTATTAGAGTTGCCCTACTTCAACATATTGATCAATATGGAGAGTCATTATCAGCACAAATTGTTGATGAGCAGGTTTACCCTCATGTTGCTACTGGGTTCTCTGATACATCTGCTTTTTTAAGGGAGCTGACTCTCAAATCCATGCTAACTCTGGCTCCAAAGCTTTCTCAAAGGACAATTTCAGGGTCGTTATTAAAGTATCTGTCAAAGTTACAGGTTGATGAAGAACCAGCTATACGAACAAATACCACCATCTTGTTGGGAAATATTGCAACCTACTTAAATGATGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACTGCTCGTGCTTTGCGTGATACTTTTCCTCCTGCTAGAGCAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCTACTATGACATTACTGAAGTTGCAACGCGTATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGAGCTAAGGCATTTCAAGCTGTTGATCAATTTTTACAGATAGCGAAGAATTATTATCAGAAGACAAATGTAGCAGAGGGTGCTGCAGCTGCAGGCATGGGAAGCTCGTCTGTTCCAGAAAATGCTGGCTTACTTGGATGGGCTATGAGCTCGTTGACCCTGAAGGGTAAACCTTCTGATCATCATGCTCCAGTTGCTTCAGCAACCACTAGCACACGTACACAAACAACTTCTAGTGCCAGCTCAGCTGTAGAAACACCATCAACAGTACCTGTCCGAGTAAGCTCCTCAACTGATTTTGCTGAACAGCCTGCTCCTCCATCCCCTACATCAACGGATGGTTGGGGGGAACTAGAGAACGGAATTGATGAAGAGCATGAAGATGACAAAGATGGGTGGGGTGATCTGGAACCACTAGAAGAATCGAAGCCAGCTCCGGCTCTTGCAAACATTCAAGCAGCTCAACGGCGGCCAGTTACTCAACCTGTTGCACAGACAAAACTAGCCTCAAATTCGAGAAGCAAAAGTACACCGAAGTTGAACGAAGATGATGAATTGTGGGGTTCCATAGCAGCTCCTGCTCCGAAAACATCAAAACCTTTAAATTTGAAACCAAATGCAACTGATGATGATGACCCCTGGGCCGCTATTGCTGCTCCTGCACCCACCACTAAGGTCAAACCCTTGGCAGCAGGCCGAGGCCGGGGAGCCAAACCAGCTGCTCTAAAATTAGGTGCTCAGAGGATAAACCGAACATCATCATCTGGGATGTAA 2388 0.4489 MFKFLKEVVGGSGTGLKDLPYNIGEAYPSAWGSWVHHRGTNKDDGSPVSIFSLTGSTAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEVETYDGSSPKVTIYIVTEPVMPLTDKIRELGLEGTQRDEYYAWGLHQVAKAVSFLNNDCKLVHGNVCMASVVVTQTLDWKLHAFDVLSEFDGNNETSSTSMLQYAWLVGAQYKPMELVKSDWAAIKKSPPWSIDSWGMGCLIYEIFSGTRLGKTEELRNTGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRPIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKVLPTIVKLYASNDRSIRVALLQHIDQYGESLSAQIVDEQVYPHVATGFSDTSAFLRELTLKSMLTLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIATYLNDGTRKRVLINAFTARALRDTFPPARAAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRAKAFQAVDQFLQIAKNYYQKTNVAEGAAAAGMGSSSVPENAGLLGWAMSSLTLKGKPSDHHAPVASATTSTRTQTTSSASSAVETPSTVPVRVSSSTDFAEQPAPPSPTSTDGWGELENGIDEEHEDDKDGWGDLEPLEESKPAPALANIQAAQRRPVTQPVAQTKLASNSRSKSTPKLNEDDELWGSIAAPAPKTSKPLNLKPNATDDDDPWAAIAAPAPTTKVKPLAAGRGRGAKPAALKLGAQRINRTSSSGM* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2010 795 Pfam Protein kinase domain 41 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2010 795 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 792 - -
Amo19g2010 795 SUPERFAMILY ARM repeat 293 554 IPR016024 -
Amo19g2010 795 SUPERFAMILY Protein kinase-like (PK-like) 36 287 IPR011009 -
Amo19g2010 795 MobiDBLite consensus disorder prediction 594 678 - -
Amo19g2010 795 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2010 795 Gene3D Transferase(Phosphotransferase) domain 1 112 280 - -
Amo19g2010 795 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Amo19g2010 795 PANTHER - 1 792 - -
Amo19g2010 795 MobiDBLite consensus disorder prediction 691 777 - -
Amo19g2010 795 Gene3D - 282 560 IPR011989 -
Amo19g2010 795 MobiDBLite consensus disorder prediction 602 653 - -
Amo19g2010 795 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Amo19g2010 795 MobiDBLite consensus disorder prediction 692 714 - -
Amo19g2010 795 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2010 Amo-Chr19 72457655 72467474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2010 70 291 MAP Kinase Kinase Kinase AT5G66850 25.523 1.01e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Amo19g2010 Pkinase 9.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2010 K08876 - gmx:100782748 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2010 19 72457655 72467474 Amo09g1677 09 66360826 66370590 hybridization