Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1989 ATGCATGATTTAATACGAGATATGGGCTTGAATATTGTTCGTCAAGGCATTAAAGATCCTGGAAAACGTAGTCGATTGAAGGATATTGAAGAAGTTTCAGATGTGCTTGAATATAAAAGGAAGGGAAGTGATGCAATTGAAGGTATAAAATTAGATTTGTCTCAAATTGATGATCTACACTTGAACTCTAAAGCATTCAGCATGATGAGTGATCTAAGATATCTAAAATTGTATGCTCCCTCTGGCAAGACTTTGGGTAACATGGTGTATCCGGAAGTCCTTAATGAATTTTCAGGTAAGCTGAGCTACCTTGAATGGCATGGATATGGTTTGAAGTCTCCACCGGAAAATTTGTTTACTCAGAGGCTTGTTGAGATTTGTATGCCGCACAGCCATATTACCAAACTTTGGCATGGGGTGAAGAATCTTGTGAGTTTAGAGAGAATTGATCTAAGTGAATGCAAAGAGTTGGCGAATCTCCCGGATTTGTCCAAGGCATCAAAACTTAAATCGCTTAACCTTTCTGGTTGTGAGAGCTTGGCAGAGCTTCATTCATCTATTTGGTCTCTTGACGCTCTTGAAATTCTAGCACTGGATGGATGCAGAAAACTCACAAGTTTGAGAAGTGAGAAGCACTTGAAATCTCTCAAGACGATCAGTGTTAACGGCTGCACAAGTCTCAGAGAATTTTCCGTGTCCTCTCGTGTGATGGAATGTCTAGATCTGAGAAATGCTGGAATAGAAGAATTGCACCAATCAATTCAGCGCTCAAGCAAGCTTAAGTCACTCTACCTAGACAGTTTGATACTTAATTACTTATTGAGAATCTTCCAAATGAGTTATCACTCCTTAAGAATCTTTCAGAGCTGA 870 0.3931 MHDLIRDMGLNIVRQGIKDPGKRSRLKDIEEVSDVLEYKRKGSDAIEGIKLDLSQIDDLHLNSKAFSMMSDLRYLKLYAPSGKTLGNMVYPEVLNEFSGKLSYLEWHGYGLKSPPENLFTQRLVEICMPHSHITKLWHGVKNLVSLERIDLSECKELANLPDLSKASKLKSLNLSGCESLAELHSSIWSLDALEILALDGCRKLTSLRSEKHLKSLKTISVNGCTSLREFSVSSRVMECLDLRNAGIEELHQSIQRSSKLKSLYLDSLILNYLLRIFQMSYHSLRIFQS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1989 289 Gene3D Ribonuclease Inhibitor 22 286 IPR032675 -
Amo19g1989 289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 266 IPR044974 GO:0006952
Amo19g1989 289 Pfam Leucine Rich Repeat 123 141 IPR011713 -
Amo19g1989 289 SUPERFAMILY L domain-like 50 275 - -
Amo19g1989 289 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1989 Amo-Chr19 70001405 70002449 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1989 1 267 WRKY Transcription Factor Family AT4G12020 34.420 1.88e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1989 - - ahf:112778692 501.516