Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1987 TTAATAAAAGAAAAAAATAATAGAGAAGGAACAGAGAATAAACTTACTTTTTCAGAACAGAACTTCAATGATATACAATATTTTAAAAGGCGGCGAAGACTCACATGCATCATTGAGAAAATGGTCGGAGATGTATTGGAAATGCTGGAGTTAAGGTTCCCTAAGGAACTAAAATCCAAAGACCTTGTTCGATTTGACAAAATCCTCAAAGAGATGCAATTGTTGCTGTCAAAAAACAGAGGTAATTTGTTAGTTGGAAATGTTCAAGTAATCGGAATTTGCGGTATGAGCGGGATAGGTAAAACAACCATCGCAAAAATCCTTTTTTCCCAACACTTTCCCTTATATGACAGTGTTTGCTTCATAGAAAATGTGAAAGAAGCATCACAAAACATAGAATCTTTAAAAGAGAAGATGGTTTCTGAGCTTCTAAAGGATGAAAATCAAAACTCTAAAGAATCCACATTATTAATTGGAAAGAGGCTTAGTAACAAAAAGATTTTTGTTGTGCTTGATGATGTGGATAATTTAGAACAAGTAGAAGTATTGTGTGAAGAATTTAGATATGCAAGTCCAGAGAGTAAACTCATTATAACTACAAGAAATAAGGATTTGCTTAGGGGAATAATGGTTGATGAATATGATGTTTATGAGATTAAGACATGGAGCTTTGAAGAATCTCTAGAGCTCTTTTGCTCGAGTGCCTTCAAGAGCAAGCATCCGAAGAAAGGATACGAGGATATTGCGAAAAGGGCGGTTGATTATGCCGGTGGTGTTCCGTTGGCTTTGAACGTTTTGGGTTCGAGTCTTGGTGATAGAAGCATTGAATTTTGGGAGAGGGAATTGGATAAGGTCGAGAACTATTCTTGTGACCGGATTCAAAAGGTGTTGCGAGTGAGCTATGAAGGACTACATGATATTGAGAAGAAAATATTTCTAGACATTGCATTCTTTTTCAAAGACGAGAGTAAAGATTTTGTGGAAAGGGTTTTGAATGCTTGCGGTTTCTATGCTACCGGTGGTTTGAAGGTCCTTGAAGATAAAGCTCTCATAACCATTTCAGATGGCAACAAAATAAAAATGCATGGTTTGGTGCAAGATTTGGCTTTGAGTATTGTTCGTGAAGGCATCGAAGATCATGGAAAACGTAGCCGGTTGAGAGACATTGCTGAAATTTCTAGTGTACTTGAATGCAAAAATAAGGGGAGTGATGCTGTTGAAGGTATAAAGTTAGATTTGTCACAAATTGACGATCTACACTTAAATGCTAACGCATTTAGCATCATGACTGAACTAAGATTTTTGAAATTGCATACTCCCTGTGGTAAGATTTCGGGTAACATGGACTATCCTATTGTCCTTGATCAATTTTCTTCCAAGTTGAGTTATCTTGAGTGGAACGGATACCGCTTAAAGTCTCTTCCAGAAAGTTTCTGTGCTACGAAGCTTGTCGAGATTCGAATGGTCCAGAGCCACATAACAGAACTTTGGCATGGGGTTAAGAATCTTGTGAATTTAGAGGGAATTGATCTAAGTGAGTGCAAATATTTGGAGAATCTTCCAGATCTGTCCAAGGCATCTAAACTCAAATGGTTGAATCTTTCTGATTGTGAGAGCTTGGTTGAGCTTCATCCATCCGTTTTGTCTCTTGACACGCTTGAAACTTTGATCCTCAATGGCTGTAAGAAACTCAAGAGTTTAAAGAGCGAGAAGCATTTCAGATCTCTCAAGAAAGTCAGTGTGGAGGGATGCACCAGTCTGAAGGAGTTTGCGCTGTCCTCCGATAAGATGGAGAGCTTGGAACTGAAGAATGCAGGAATAGAACAACTGCACTCGTCGATAGGGCTTTCGAGCAACCTTAGATATCTGAATCTAGAAGGTTTGAGATTCCAGAATGTTCCAAATGAGCTATCATCCCTTACAAGCCTTGCGGAACTAAGAATTTCTGATTGCAAAGAACTAGTTCTTGAAAAACAGAAATTGCAAGCATTGTTTGATGGTCTAAGATCTCTAAGATTGCTGCATTTGAAGGATTGTTCAAACTTGCTTGAACTTCCTGAAAACATTAGCGTGTTGTCCAAGTTATGTGAGCTGAGACTAGACGGAAGCGGCGTAGAAACGTTGCCTGAAAGCATCAAGCATCTTTCGCTGCTCGAAATTCTTTCCTTAGAGAATTGCTTGAACCTCAGGCAACTGCCAGAGCTTCCAACAACCATCAAAGAATTAACCGCCGCTAACTGCAAATCGTTGGTGACAGTTCCCACTTTGAAGACTCTTGCAACCATGATGACAGGGCGAGAGAAGTTCGTGTCGTTTGAGAATTGCACGAAACTAGACGGATCTTCGCTCTGCCGGATAGCGGAAGGTGCAGAGTTATCATCAATGAATGCCGCTTTTCAGAATGTGTTTGTAAGAAGCAAAGGCGCCAGCGGTGCCAGCTGTCACAACTACAACTTTGTTAAGGTGTGTTCACCAGGAAGCAGAGTCCCGGAGCAGTTCACATACCGAAGCAGAGAGTCCTCTTTCAAAGTCAAAATTCCTTCACACTCCAACATTTTGGGAATGGTTTTGTCTGTGCTTATTTCGCCAAGCGAAGGAATCAAGAACCATGGTGCCAGAATATTTTGTCAGTGCTATGATGCTGATGGTAGAAAAGTGGGGTATGCTACTAGGTGGTTCCATGAAGCTACCAAGGATTTGAAAGGTGATCATGTTTTTGTTTGGTATGATGCACTTCATTTTGATAGCATTGTTAAAAGCCTTGAAGAACAAGAAATTATTTTTGAGTTCTTTGTTGCAAATGAATTGGGGGAACGTGATGTGTTAAATGTTCTTCCAAAAGAGTGTGGGGTGCGCTTGATTTTTGACTCAGAGTTGCACAATCTTTTGAGGAATTTGGAGTTGGATTTTGAATCCAAGTGGGAGCTAGGGTTGCGGTTAGGTTCGGAGTTGGGATTGGAGATGGGATCAGAGCTAAGGTTGGAGTTGGAGTCACAACAACATAGACCAATCTCAATGGCAACTGAGAGATTTTATTTCAATGAGGACGAAAGCGATGGATTATACAATGAAGAACACGTTCATCAGAGTGAAAGAAAGGGGATACACAATATCAAGATGTTCTCAGTGGAAGATATGATTGTTTCTATGACTTCTTCAAATGCGACCCGCATAAAGTATTAG 3183 0.3987 LIKEKNNREGTENKLTFSEQNFNDIQYFKRRRRLTCIIEKMVGDVLEMLELRFPKELKSKDLVRFDKILKEMQLLLSKNRGNLLVGNVQVIGICGMSGIGKTTIAKILFSQHFPLYDSVCFIENVKEASQNIESLKEKMVSELLKDENQNSKESTLLIGKRLSNKKIFVVLDDVDNLEQVEVLCEEFRYASPESKLIITTRNKDLLRGIMVDEYDVYEIKTWSFEESLELFCSSAFKSKHPKKGYEDIAKRAVDYAGGVPLALNVLGSSLGDRSIEFWERELDKVENYSCDRIQKVLRVSYEGLHDIEKKIFLDIAFFFKDESKDFVERVLNACGFYATGGLKVLEDKALITISDGNKIKMHGLVQDLALSIVREGIEDHGKRSRLRDIAEISSVLECKNKGSDAVEGIKLDLSQIDDLHLNANAFSIMTELRFLKLHTPCGKISGNMDYPIVLDQFSSKLSYLEWNGYRLKSLPESFCATKLVEIRMVQSHITELWHGVKNLVNLEGIDLSECKYLENLPDLSKASKLKWLNLSDCESLVELHPSVLSLDTLETLILNGCKKLKSLKSEKHFRSLKKVSVEGCTSLKEFALSSDKMESLELKNAGIEQLHSSIGLSSNLRYLNLEGLRFQNVPNELSSLTSLAELRISDCKELVLEKQKLQALFDGLRSLRLLHLKDCSNLLELPENISVLSKLCELRLDGSGVETLPESIKHLSLLEILSLENCLNLRQLPELPTTIKELTAANCKSLVTVPTLKTLATMMTGREKFVSFENCTKLDGSSLCRIAEGAELSSMNAAFQNVFVRSKGASGASCHNYNFVKVCSPGSRVPEQFTYRSRESSFKVKIPSHSNILGMVLSVLISPSEGIKNHGARIFCQCYDADGRKVGYATRWFHEATKDLKGDHVFVWYDALHFDSIVKSLEEQEIIFEFFVANELGERDVLNVLPKECGVRLIFDSELHNLLRNLELDFESKWELGLRLGSELGLEMGSELRLELESQQHRPISMATERFYFNEDESDGLYNEEHVHQSERKGIHNIKMFSVEDMIVSMTSSNATRIKY* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1987 1060 Gene3D - 46 213 IPR027417 -
Amo19g1987 1060 Pfam NB-ARC domain 83 302 IPR002182 GO:0043531
Amo19g1987 1060 Gene3D Ribonuclease Inhibitor 595 784 IPR032675 -
Amo19g1987 1060 Gene3D Ribonuclease Inhibitor 390 594 IPR032675 -
Amo19g1987 1060 PANTHER NB-ARC DOMAIN PROTEIN 36 837 - -
Amo19g1987 1060 Pfam C-JID domain 825 959 IPR045344 -
Amo19g1987 1060 SUPERFAMILY L domain-like 360 751 - -
Amo19g1987 1060 PRINTS Disease resistance protein signature 161 175 - -
Amo19g1987 1060 PRINTS Disease resistance protein signature 256 270 - -
Amo19g1987 1060 PRINTS Disease resistance protein signature 90 105 - -
Amo19g1987 1060 PRINTS Disease resistance protein signature 501 517 - -
Amo19g1987 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 36 837 IPR044974 GO:0006952
Amo19g1987 1060 Gene3D - 223 305 IPR042197 -
Amo19g1987 1060 Coils Coil 125 145 - -
Amo19g1987 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1987 Amo-Chr19 69995360 69999629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1987 87 954 WRKY Transcription Factor Family AT5G45050 28.510 5.09e-80 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1987 - - ahf:112709325 1964.5