Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1978 ATGCACACTCACTTGATTCTAGTGCTCTTCTTGTACTGTTGCATTGGCTTCTCTGTTACTTTTTCTGAGGGAGCTCAAGCTCAAGCGGCATCAGATGATGAATTGTCCACTCTGCTAGCGATGAAGTCGAGTCTCGTTGATTCGAGGAATCATCTGAAGGATTGGCAGATACCAAGCAATGCAACACAGCCTGCAGCAAGTTCAATAATACATTGTAATTGGACTGGAGTTTTTTGCAACTCTAGAGGCTTGGTAGAAGGTCTTGATCTCTCCAACATGAATCTTAGCGGCCGTGTATCAGATGGAATCCAATTCCTTTCAAGCTTGTCTTATTTCAACATAAGCTGCAACAGTTTCGCTTCATCATTGCCAAAGTCACTGTCCAACCTCACCTCAATGAAGACCTTTGATGTGAGCCAGAACTTCTTCACTGGCAGCTTTCCCAGTGGTCTTGGAAGAGCTGCAGAGTTGAGATCAATTAATGCGTCAAGCAATGACTTCTCAGGGCTTCTTCCTGAGGATATTGGAAATGCGACAATGCTCGAGAGCCTCGACTTTCGCGGAAGCTACTTTGTAAGTCCAATTCCCAAGAGTTTCACAAATTTGCAGAAGCTCAAATTTCTTGGCCTTTCAGGCAATAACTTCAAAGGGGAGATTCCAGATTATCTCGGTGAACTTTCTTCTCTGGAGACATTGATTATGGGATACAATGAGTTCAAAGGTGAGATCCCAGCAGAGTTTGGGAATCTGACCAATCTTCAATACCTTGATTTGGCTGTAGGCACTCTCAGTGGACAAATACCACCTGAATTGGGTAAGCTGAAAAATCTTACAACAGTTTACTTATACAGAAACAACTTCACTGGAAAAATTCCACCTCAACTTGGCAGCATAATGTCACTAGTATTTTTGGATCTATCTGACAATCAAATCTCAGGAGAGATTCCAGAAGAACTTGCTAATTTGGAAAACCTGCAGCTTCTGAATTTGATGAGCAATGAAGTTACTGGTCTAGTACCGAATAAGCTTGGCGAATTGAAGAATTTGCAGGTGCTTGAGTTGTGGAAGAATTCTTTAGAAGGTCCTTTGCCTGTTAACCTTGGAAAGAACTCTCCATTGCAGTGGTTGGATGTGTCCTCTAACTCGTTATCTGGGGAGATCCCACCAGGTTTGTGTACTACAGGCAATCTCACAAAACTAATCCTCTTCAACAATTCCTTCTCTGGTTCCATTCCAACTGGACTTTCAAACTGTTTGTCCTTAGTTCGTGTTCGGGTTCAGAACAATCATATTTCCGGGACTATTCCGGTCGGCTTTGGAAACCTTCCGGCCCTTCAACGGCTGGAGTTGGCAAAGAACAACCTCACTGGCCAAATTCCTATAGACATTACCTTATCCTCATCTCTCTCTTTCATTGATGTATCATGGAACCACCTTCAGTCTTCTCTACCTTCTGAGATTCTCTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAGCTTCAGAGGCAATTTCCCAGATGAGTTTCAGGACTGTCCCTCTCTCTCTGTTTTGGATCTTTCAAACACCGAACTCTCTGGAAAAATCCCAGAAAGTATTGCTTCGTGTCAAAGATTAGTGAACCTTAACCTTAGAAACAACCAATTGACAGGTGGAATCCCCAAATCAATCACAAACATGCCAACCTTATCTGTTCTTGATCTGTCCAACAATTCACTCACAGGTGAAATACCTGAAAACTTCGGTATTTCCCCGGCCCTCGAAACGCTGAACCTCTCCTACAACAAGCTCGAGGGTCCAGTACCATCAAATGGTATCTTAATGTCCAGAAATCCTAATGATCTTGTAGGCAACCCTGGTCTCTGTGGCAGCATTCTCCCTCCATGTTCTCAGAATTTCACTGTCACAACCCATCAAAAACCTGGCAAGCACACCAAGCACATCATCATCGGTTTCTTGACCGGCATTTCAGTGATCCTATCCATTGCTGCAGCATACTTAGCTGGCAGATTTATATACAACAGAACCTACTTGTACAACAGTTTCATCCATGATTGGTTCAAAAGTAGCAATGAAGATTGGCCATGGAGACTAGTAGCATTCCAAAGGGTGAGTTTCACAAGCACCGAGATCCTAACTTGCATACAGGAGTCAAATGTCATAGGAATGGGAGCCACCGGCATTGTTTACAAAGCTGAAATCCATAACAGACCGCACATGACAGTCGCTGTTAAGAAGCTACGGAGATCAGGATCAGACATAGAGAATGGCTACAGTGATGTGGTAAGAGAAGTGGAGCTCTTAGGGAAACTAAGGCACAGGAACATTGTGAGGCTATTGGGGTATGTGCATAATGAGAGAGATGTTATAATGGTTTATGAGTACATGGCTAATGGGAACTTGGGGAATGCACTGCATAGTGGTGAACAATGTGAGAGGTTGCTTGTGGATTGGGTTTCAAGGTACAACATTGCTCTTGGTGTTGCTCAAGGGCTTCACTATCTTCACCATGATTGCCATCCACCTGTTATTCATAGGGATATTAAGTCCAATAATATACTTCTTGATGCAAATTTGGAGGCGCGGATCGCGGATTTCGGCTTGGCGAAGATGATGATCCATAAGAATGAGACTGTTTCAATCGTGGCTGGATCATATGGTTACATTGCACCAGAATATGGATATACCCTGAAGGTGGACGAGAAGATTGACATATATAGTTATGGTGTGGTGCTTTTGGAGCTAGTAACTGGAAAAATGCCATTAGACCCTTCGTTTGGAGAATATGTCGACATAGTGGAGTGGATAAGAAAGAAGAAGAGCAACAAAGCACTGGAAGAAGCACTAGACCCAAGCATAGCTGGTCAGTGCAAGCACGTCCAAGAAGAGATGCTTCTTGTGCTGAGAATAGCACTCCTATGCACTGTGAAGCTTCCCAAGGAAAGGCCATCCATGAAGGATGTGAATGGTGGTTCGGGTGGAGTCGAGGTTGGAGCAACTGGGTGCGAAGGGGATCAGAACCGGGGCGCGAGCTTTGAGAGAGAGAGAGAC 3057 0.44 MHTHLILVLFLYCCIGFSVTFSEGAQAQAASDDELSTLLAMKSSLVDSRNHLKDWQIPSNATQPAASSIIHCNWTGVFCNSRGLVEGLDLSNMNLSGRVSDGIQFLSSLSYFNISCNSFASSLPKSLSNLTSMKTFDVSQNFFTGSFPSGLGRAAELRSINASSNDFSGLLPEDIGNATMLESLDFRGSYFVSPIPKSFTNLQKLKFLGLSGNNFKGEIPDYLGELSSLETLIMGYNEFKGEIPAEFGNLTNLQYLDLAVGTLSGQIPPELGKLKNLTTVYLYRNNFTGKIPPQLGSIMSLVFLDLSDNQISGEIPEELANLENLQLLNLMSNEVTGLVPNKLGELKNLQVLELWKNSLEGPLPVNLGKNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFSGSIPTGLSNCLSLVRVRVQNNHISGTIPVGFGNLPALQRLELAKNNLTGQIPIDITLSSSLSFIDVSWNHLQSSLPSEILSIPTLQTFIASHNSFRGNFPDEFQDCPSLSVLDLSNTELSGKIPESIASCQRLVNLNLRNNQLTGGIPKSITNMPTLSVLDLSNNSLTGEIPENFGISPALETLNLSYNKLEGPVPSNGILMSRNPNDLVGNPGLCGSILPPCSQNFTVTTHQKPGKHTKHIIIGFLTGISVILSIAAAYLAGRFIYNRTYLYNSFIHDWFKSSNEDWPWRLVAFQRVSFTSTEILTCIQESNVIGMGATGIVYKAEIHNRPHMTVAVKKLRRSGSDIENGYSDVVREVELLGKLRHRNIVRLLGYVHNERDVIMVYEYMANGNLGNALHSGEQCERLLVDWVSRYNIALGVAQGLHYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIHKNETVSIVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELVTGKMPLDPSFGEYVDIVEWIRKKKSNKALEEALDPSIAGQCKHVQEEMLLVLRIALLCTVKLPKERPSMKDVNGGSGGVEVGATGCEGDQNRGASFERERD 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1978 1019 Gene3D Ribonuclease Inhibitor 266 322 IPR032675 -
Amo19g1978 1019 Gene3D Ribonuclease Inhibitor 33 156 IPR032675 -
Amo19g1978 1019 ProSitePatterns Protein kinases ATP-binding region signature. 723 748 IPR017441 GO:0005524
Amo19g1978 1019 SUPERFAMILY RNI-like 263 610 - -
Amo19g1978 1019 Pfam Leucine rich repeat N-terminal domain 32 80 IPR013210 -
Amo19g1978 1019 SUPERFAMILY Protein kinase-like (PK-like) 708 990 IPR011009 -
Amo19g1978 1019 Gene3D Phosphorylase Kinase; domain 1 716 801 - -
Amo19g1978 1019 Gene3D Ribonuclease Inhibitor 159 265 IPR032675 -
Amo19g1978 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Amo19g1978 1019 PANTHER UNNAMED PRODUCT 11 990 - -
Amo19g1978 1019 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Amo19g1978 1019 ProSiteProfiles Leucine-rich repeat profile. 300 323 IPR001611 GO:0005515
Amo19g1978 1019 Gene3D Ribonuclease Inhibitor 323 638 IPR032675 -
Amo19g1978 1019 Coils Coil 1009 1019 - -
Amo19g1978 1019 Gene3D Transferase(Phosphotransferase) domain 1 802 994 - -
Amo19g1978 1019 PRINTS Leucine-rich repeat signature 301 314 - -
Amo19g1978 1019 PRINTS Leucine-rich repeat signature 562 575 - -
Amo19g1978 1019 Pfam Protein kinase domain 719 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1978 1019 MobiDBLite consensus disorder prediction 987 1019 - -
Amo19g1978 1019 SMART serkin_6 717 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1978 1019 ProSiteProfiles Protein kinase domain profile. 717 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1978 1019 SUPERFAMILY L domain-like 71 333 - -
Amo19g1978 1019 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 11 990 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1978 Amo-Chr19 69306279 69310084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1978 8 990 Receptor kinase-like Gene Family AT1G08590 64.493 0.0 1253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo19g1978 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1978 - - gmx:100793873 1562.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1978 19 69306279 69310084 Amo09g1454 09 51432872 51436377 hybridization