Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1952 ATGAGTGAACCAGAGGGAGGAGAGGAGGAAGACAGAGATGAGAGCACGAGCGAGAGAACAGAGAGTGAGAGTGGGTTACCACCGCAACGCCGCTGCAGCCGCCGCCATCGCCGTCGTGGAGGAGCGAGTCCGGAGGAGAGAGAGAGAAAGCCGATTCGCAGACGAGATGGAGAGAAAGGACAAAGACACGACGCGAGAGAGAATGAGGCTGTTCCGCGTGCACTGTCGTCGCTCCTGGGGTCAATTGAAGCCGCCGCCGCTGCTAGGGCTTGCCGTGCTCCTGTCCTCACTTTCGGCTTCTACGATTACTTCCTGCGTTTCATCGGTGCCGTTTTCGATGGCAAGGTGCGGATGCAATTCTCTCCTTTGAAAAGTTCAGCTGCAATCTACCCAGACCTCTTCTTCAGCATGTTAGCTGGTTTGGAATCACTTCCAGAAGCTTATCAGCAAAGAATGCCGTCCGTGATGGAACAAGTTCAAATCCGTGACAGGTCAGATATTGGCCTAAAATATGACTATATAGCCATCAATCTCTTGAAGGGAGAGAAATCTCATCCCGAATTCCTCAAGCTCAACCCCGTTGGTTTCGTGCCAGTTCTGATGGATGGCGATCTTGTGCTTGCTGACTCCTTAGCCATTATTATGGGAAAGAAGGGGATTTGGCTTAAGTTGCCTATTGAGAAAAGAATACTCTTTGGACAGTTGATTCTGGCGGCTGCAGGTGTAGTTAAAGATTGCAAGTGCATTGCTTTTCCTCTTGTTAAACCAGCATTGGTTGCCTCCGGTACTCATTGGGTTGAACCAGACACCATGGCAGCAAAAGATGGTAATCTCATTACTGCCGCCACTTATGAAGGGCACCCTGAATTTATTCAGCACTTTATGAAGGCACTAGGAGGCAACATAAGTGGCTCCAACAAAAAAATCCTTTCTTTGTGGGGTACGTTCAAGTGA 954 0.4969 MSEPEGGEEEDRDESTSERTESESGLPPQRRCSRRHRRRGGASPEERERKPIRRRDGEKGQRHDARENEAVPRALSSLLGSIEAAAAARACRAPVLTFGFYDYFLRFIGAVFDGKVRMQFSPLKSSAAIYPDLFFSMLAGLESLPEAYQQRMPSVMEQVQIRDRSDIGLKYDYIAINLLKGEKSHPEFLKLNPVGFVPVLMDGDLVLADSLAIIMGKKGIWLKLPIEKRILFGQLILAAAGVVKDCKCIAFPLVKPALVASGTHWVEPDTMAAKDGNLITAATYEGHPEFIQHFMKALGGNISGSNKKILSLWGTFK* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1952 317 Gene3D - 230 304 IPR029062 -
Amo19g1952 317 PANTHER DJ-1 PROTEIN 223 315 IPR006286 -
Amo19g1952 317 Pfam Glutathione S-transferase, N-terminal domain 167 214 IPR004045 -
Amo19g1952 317 MobiDBLite consensus disorder prediction 1 16 - -
Amo19g1952 317 SUPERFAMILY Thioredoxin-like 167 214 IPR036249 -
Amo19g1952 317 MobiDBLite consensus disorder prediction 39 70 - -
Amo19g1952 317 MobiDBLite consensus disorder prediction 1 70 - -
Amo19g1952 317 Pfam DJ-1/PfpI family 233 296 IPR002818 -
Amo19g1952 317 Gene3D Glutaredoxin 164 215 - -
Amo19g1952 317 SUPERFAMILY Class I glutamine amidotransferase-like 233 300 IPR029062 -
Amo19g1952 317 PANTHER DJ-1/THIJ/PFPI FAMILY PROTEIN 223 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1952 Amo-Chr19 66644302 66648512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1952 168 215 Glutathione S-transferase Gene Family AT2G02380 60.417 2.52e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1952 K18881 - ahf:112771902 146.362